Oryzias melastigma (Indian medaka): 112145662
Help
Entry
112145662 CDS
T07439
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112145662 (bcl11ba)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112145662 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
Zn_SUZ12
DUF3268
DUF7565
Motif
Other DBs
NCBI-GeneID:
112145662
NCBI-ProteinID:
XP_024126795
Ensembl:
ENSOMEG00000019117
LinkDB
All DBs
Position
LG22:3444813..3492690
Genome browser
AA seq
842 aa
AA seq
DB search
MSRRKQGNPQHLSQREITPEVERTDGVLLSDTPPPNPFGLLPPHPLDPGLAHALPPGLHA
DHDLLTCGQCQLTFPLGDILLFIEHKKKQCQTPLLPNGCYDKMNDRGGGGGGGGLQSLHH
YAQRGELKKVVEPVEIGIQVTPEEEEVVGGGRQRAERREKTPTRGICPKQESSMTGGRDE
PSNYICTTCKQPFPSAWFLLQHAQNTHGIRIYLESNPSSAALTPRLTMPPPIGNDSIPQS
PLTNFLGDNNPFHLLRMTGPLLREPPPGFVENRIPNTPPFVSPPPRHHLDPHRLERLSAE
EMGLISQHPSAFERVMRLTPMAMESQSMDFSRRLRELAGNTNSTTPPLSPGRPNHMHRLL
NPNPFQTGPKSPFLNTPPLPPMPPNSTTPPQTQNKVKSCEFCGKTFKFQSNLVVHRRSHT
GEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSMTGRSDDGLSTTSSPEPGTSDVTGEGI
KNRDGDFQGEGNEEEEEEEEEEELENESRPESNFSMDSVFYRNRENGPKPPSEEKSSLAL
EKMVDGEGLNSIQQYNNLIVDNRKRMPFSKRVTDAQRDTGDEDSVAGEINHHQQEERTTI
NGRNCGSGDSFSGLFPRKPTPITSPTLSNSSNKRIKIEKDLDIPPAPHIPSENVYSQWLV
GYAASRHFIKDPFLGFTDSRQSPFATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASG
GSTPHLGGGPGPGRPSSKDSRRCDTCEFCGKVFKNCSNLTVHRRSHTGERPYKCELCNYA
CAQSSKLTRHMKTHGQLGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTSEVKIEQAE
RA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccgcagcacctgtcccagagagaaataacaccggag
gtcgagcgtacagatggcgttctgctctccgacactccgcccccaaacccgttcggcctt
ctccctccccacccgctggaccccggcttggcccacgcgctgccgcctggcctgcacgcc
gaccacgacctgctgacctgcggccagtgccagctgaccttcccgctgggcgacatcctc
ctcttcatcgagcacaagaagaagcagtgccagacgccgctgctgcccaacggctgctac
gacaagatgaacgaccggggaggaggaggagggggcggcggcctgcagagccttcatcac
tacgctcagcggggggagctaaagaaggtggtggagccggtggagattggcatccaggtg
acgccggaggaagaggaggtggtgggaggaggaaggcaaagagctgaaagacgagagaag
acgcccacaagaggaatttgccccaagcaggagagctccatgacaggtggcagagatgag
ccttccaactacatatgtaccacctgtaagcagccgttccccagcgcctggttcctcctg
cagcatgcccagaacactcatggcattcgcatttatctggagtccaacccctcaagtgca
gctctcaccccccgattaactatgcctccccctattggaaacgactccatcccgcagtct
ccgctcaccaactttctgggggacaacaatcctttccacctcctgaggatgacggggcct
ctactccgggaaccgccccctggcttcgtggagaaccgaatccccaacaccccgccattc
gtcagcccgcctccccgtcatcatctagatccccaccggctggaacgccttagcgccgaa
gaaatgggcctcatttcccagcaccccagtgcctttgagagggtgatgcggctaacgccc
atggccatggagtcccagtccatggatttctccaggcgattacgggagctggcagggaac
actaacagcaccacaccgccactgtcacccggaaggcccaatcatatgcaccgactacta
aaccccaacccttttcaaacagggcctaagtcgccgtttttaaatacccctccattgccg
ccgatgccaccaaacagcaccacaccccctcaaacccaaaacaaggtgaagtcctgcgag
ttctgtgggaagactttcaagttccagagcaacttggtggtgcacagacgcagccatact
ggggaaaaaccatacaagtgccagctgtgtgaccacgcctgctcccaggccagcaagctc
aagcgacacatgaaaacccacatgcacaaggccgggtccatgacggggcgctcagacgac
ggcctgtccaccacgagctccccagaaccaggaaccagcgacgtcaccggtgagggcatt
aagaatcgagacggggatttccagggggaaggcaatgaagaagaggaagaggaggaggaa
gaagaggaacttgagaatgagagtcgaccagaatcgaactttagcatggattctgtgttt
taccggaaccgagagaacggtcccaagcctccttcagaggagaagtcctcgcttgccctt
gaaaagatggtggatggcgagggccttaactctatacagcagtacaataatttaatagtt
gacaatcgtaaaagaatgcccttctccaagagggtcacggacgcccagcgggacactggc
gatgaggattcagtggctggggagatcaaccaccaccagcaagaagagcgaacaaccata
aacggccggaactgtggctccggcgactctttctcaggcttgttcccgcgtaagcccacc
cccatcaccagccccaccctgtccaactcctccaacaagaggatcaagatcgaaaaggac
ttagacattcccccggcgcctcacatcccgtcagagaacgtgtactctcagtggttggtc
ggctacgccgcctcccgccatttcatcaaagaccctttcttgggcttcaccgattccaga
caatctccctttgccacctcgtcggagcactcctcggagaacggcagcctacggttctcg
acgcctcccggggacctgctggacggcggtctatccggccgcagcggcaccgccagcggg
ggcagcacgcctcatctagggggcgggcccggtccaggtcgacctagctccaaggacagt
cggagatgcgacacttgtgaattctgtggcaaggtgttcaaaaactgcagcaacctgacg
gtgcaccggcgcagccacaccggggagcggccctacaagtgcgagctgtgcaattacgcg
tgcgcacagagctccaagctcacccgccacatgaaaacacacggccagctcggtaaggag
gtctaccgctgtgacatttgccaaatgcccttcagtgtatacagcactctggagaaacat
atgaaaaagtggcacggagaacatttgatgaccagtgaggtcaaaattgaacaagcagag
agagcataa
DBGET
integrated database retrieval system
