Oryzias melastigma (Indian medaka): 112145804
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Entry
112145804 CDS
T07439
Symbol
phc2b
Name
(RefSeq) polyhomeotic-like protein 2b isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112145804 (phc2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112145804 (phc2b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112145804 (phc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
SAM_2
zf-FCS_1
zf-HC5HC2H
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
112145804
NCBI-ProteinID:
XP_024127036
Ensembl:
ENSOMEG00000011817
LinkDB
All DBs
Position
LG5:19475041..19504345
Genome browser
AA seq
970 aa
AA seq
DB search
MQIKSVASTRLLSALLLLLRAELFGRCEPPSTDTCCWCWSNTKEARPQGGTRLRGLGKGH
RRAIQKSRGSKVRRAEGTMESEPGAPASTANSIGTLSATTAASSSSSTSSSTTNSSSTTS
VSTSSTSNATTTASATSASSSSSTTTTSSNTSSSVNSSTTTGRQAMPQISVYSGIPDRQT
VQVLQHFNRQPNTAAQYLQQMYAAQQQHLMLQTAALQQQHSLSTAQLQSLAAVQQASIAA
GRQTSSQNGTSSQQTGSTQATINLTTSPAAAQLISRAQSISSTPTSISQQAVLLGSQSSP
TLTASQAQMYLRAQMAQQSNLVQVARNLGRAVPLSPQLIFTPAATVTAVQSDSSAQASSQ
NQVQNLAIRGQQGATTSSSQTQTLQALSLKQNPVPIQPASLVKNPSQAAQSSSGGKAGSS
DTSSDGGKKGDGVAVTEVRAINMSRSVSAVSAQPLIAPAYTQIQPHSLVQQHKQQQFVVQ
QSSQRTAGQLLQTASIQPSQHPVPVLPKPAPHQPATPSQQATIFHSTISPHALHSSINHA
KAQPVQLTAINLQIQPTAARLLQESKDKPTSLVVRETSQPPSTQQRQQQQQHHQQQHQPA
SSSSQSSKLGEQPKVTQATPPVQPQGSNSAKRPSAATAGSPTPTMTSGNESEAPTVMGST
PQNGENKPPQAIVKPQVLTHVIEGFVIQEGAEPFPVCVERLPILIDSPKKLDHQLSSDPD
KTPVSNAANTDSEPEDVNQPEKEEPKLTCEYCGWVDFAYRFKGSKRFCSVVCAKRYNVGC
TKRIGLFRPERNKPANRWRRRPQGRPSVEAKKQKLSPLQQNQGGSVSSPHASQPSQEESS
PCSDMSSYEEPQSPLSVASSGPLAPAPVSAQVPVRQPSRALDQEGVSGRDAPSLCERFLP
SDPTKWNVEEVYEFIRSLPGCQEIADEFRSQEIDGQALLLLKEDHLMSTMNIKLGPALKI
FARINMLKDS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaaaagcgtagcctctacccgcctcctctctgctctgctgctgctactccga
gccgagctttttgggcgctgcgagccaccgtccacggatacatgttgttggtgttggagt
aacaccaaggaagctcggccacaaggaggaacacgactaagagggcttggaaaagggcac
aggagagccattcagaagagccgggggtcaaaggtgagaagagcagagggcaccatggag
agtgaacccggggcccctgcctccactgccaacagcattgggaccctttctgctaccacg
gccgcctcctcttcatcttccacctcctcttccaccaccaactcttccagcaccacatct
gtcagcactagcagtacctcgaatgccaccaccactgcttctgctacttctgctagtagc
agtagtagtactactactactagtagtaacactagcagcagtgtcaacagtagcactaca
actggaaggcaagcgatgccccagatatccgtttacagtggaattcctgacaggcagacg
gtacaggttctccagcattttaacagacaaccaaacactgcagctcagtacctccagcag
atgtacgccgctcagcagcagcatttgatgctgcagactgcggccctgcagcagcagcac
agcctcagcaccgcccagctgcaaagcctcgctgcagttcagcaggccagtatcgcagct
ggccggcaaacgtcctcacagaacggcacttcatctcaacagactgggtccactcaggcc
acgatcaacctcaccacctccccagcggctgctcagttgattagtcgggcccagagcatt
agttccacccccaccagtatttcccagcaggctgttctgctcggcagccaatccagtcca
accctcacagccagccaggcacagatgtacctgcgtgcacagatggcccagcaaagtaac
ctggtgcaggtggctaggaacctggggcgggctgttcctctgtccccacagctcatcttc
actccagctgccacagtgaccgctgtgcaatcagacagctctgctcaggcctcttcacag
aatcaagttcagaatctggcgatacgtggccagcagggggcgaccacgtcctcctctcag
actcagaccttgcaggctctcagtctgaagcagaacccagttcccattcagcccgcctca
ctggtcaagaaccccagccaagcggcccagtcctcctccgggggaaaggccggctcctcc
gacacctcctctgatggagggaagaagggggacggtgtagcggtcactgaggttcgagct
ataaacatgagccgcagcgtttccgctgtcagtgctcagcctctcatcgcccctgcgtac
actcagattcagcctcattccctggttcagcagcacaagcaacagcagtttgtggtccag
cagagttcccaacggacggcgggccagctactgcagacggcctccattcagccgtcccag
caccccgtccccgtgctgcccaagcccgctcctcaccaacccgccactcccagccagcag
gccaccatcttccactccaccatcagccctcacgctctccactcctccatcaaccacgcc
aaagctcagcccgtccagctcactgccatcaacctacagattcagccaacggctgctcga
ctgcttcaggaaagtaaagacaaaccaacctctttggtggtcagagagacgagtcagcct
ccatccacgcagcagcgacaacaacaacaacagcatcatcaacaacaacatcagcctgcg
tcctcctcatcacaatcatccaaactgggagaacaacccaaagttacccaggccacgcct
cctgttcaaccacaaggatccaattctgcaaagagaccaagtgcagcgacagcagggtcc
ccaactcccaccatgacttcaggaaacgagagtgaggcgcccaccgtgatgggcagcacg
ccacagaatggagagaacaagccgccacaggccatcgtcaagcctcaggtcctcacacat
gtaatcgaagggttcgtcatccaggagggagcagagccgttccccgtatgtgtggagcgt
ttgcccattctcattgacagtccaaagaaactggatcatcagctgtcctcagatcctgac
aaaactccagtcagcaacgctgcaaacacagactctgagcccgaggatgtaaaccagccg
gagaaagaagaacccaagctgacctgtgaatactgcggctgggtagactttgcctacagg
ttcaaaggctccaaacgcttctgttctgtggtttgtgccaaaaggtataatgtcggctgc
acaaagaggattggactttttcgtccagaaaggaacaaaccggctaatcgctggcgtcgg
agaccccagggtcggccaagtgtagaggccaaaaagcagaaactttcccccttacagcag
aaccagggtggctcagtatcctccccacacgcctctcagcccagtcaggaggagtccagc
ccgtgttcagacatgtccagctacgaagagccgcagtctcctttgtcagttgccagctca
ggaccccttgcacccgctccagtctccgctcaggtccctgtccgtcagccaagcagggcc
ttggaccaggagggcgtctctgggagagatgccccgtcgctctgtgaacgctttctaccc
agcgaccccaccaagtggaacgtggaggaagtttacgagttcatccgctcgctgccaggc
tgtcaggaaattgcagatgagtttcgctctcaagagatcgatggacaggctttgctctta
ttgaaggaggaccacttgatgagcaccatgaacattaagctgggaccagcacttaagatc
tttgcacgcatcaacatgctcaaagactcatag
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