Oryzias melastigma (Indian medaka): 112146242
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Entry
112146242 CDS
T07439
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b
KO
K09063
transcription factor E2-alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112146242 (tcf3b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
112146242 (tcf3b)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
112146242
NCBI-ProteinID:
XP_024127720
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Position
LG4:complement(3109550..3133330)
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AA seq
627 aa
AA seq
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MSEQQRMAAVETDKELSDLLDFSAMFAPPVANGKNRTMTLASTHFAGSDERSGSASWTPA
EQNSPSFSQGRAYADGSHFSEHDGLSSPFISSGISGKADRPYPHFGSQPNFLPSDIAMPS
PDAMSPSGVKSASQFYPSYPNNPRRRPPEGGLEAQPKKIRKPPGLPSSVYVSTSGEEFTR
DGGGYTGAKPGAVYPGSFFMQEDPWSSSSSYSPMLGNIGQPGSFPAISPQDRMNYPLHST
EVNGFHTAPTTYNHTPTLNGESIMAAGRGTTASSSGDEIGKALASIYPSDHNSNNFPSAP
STPGSPQAIAGAPSQWQRPTSPPFEGQPHALQSKMEDRLEEAIHVLRSHAVGQSPALDAA
HSDMHGLLPPVHNGGLGGLSPAFPNASLALSNRHPAMGGKHEEPAGLPPSSTLLHGHHAS
GPTQPVSQSEGFAGLPGGLARSSLSSSSSDIKREDKEDDENSSVADKSEEEKKDPKAARS
RTRKEALTLQMFSGLSDQKDDPDNEDDEDIPPEVKMERERERRVANNARERLRVRDINEA
FKELGRMCQLHLSHDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSG
VGAEAPMQLSGGHPSMGGDGHNPVGHM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagcagagaatggctgcagtggaaactgacaaggaactcagcgacctcctg
gatttcagcgcgatgtttgcgcctccagtcgccaacgggaagaaccgaaccatgactctg
gccagtacgcatttcgctggatcagatgaacgcagcggatccgcgtcctggacccctgcc
gaacagaacagcccctccttcagccaaggacgggcctacgcagatggaagccacttcagc
gaacacgacggcctgtcctctcccttcatcagttcagggatttctggtaaagccgaccgg
ccgtatcctcacttcggaagtcagcctaacttcctccccagtgacatagcgatgcccagc
ccggacgccatgtccccgtctggcgtgaagtccgcctctcagttttacccgtcctacccc
aacaaccccaggaggaggccgcctgaaggaggtttagaagcccagcccaagaagatccgg
aaaccccccggcctgccgtcctcggtttacgtttccacgtcaggggaggagtttaccaga
gatggcggaggatacacgggcgccaagcccggcgccgtctatcccggctccttcttcatg
caagaagacccctggtcctcctcctccagctactcccccatgctggggaacatcggacag
cccggctccttccccgccatcagcccccaggacagaatgaactaccctctgcatagcacc
gaagtcaacggcttccacacagcccccaccacctacaaccacacacccaccctcaacgga
gagagcattatggcggccggccgaggcaccacagccagcagctcgggggacgagatcggg
aaggcgctggcctcgatttacccgtctgaccacaacagtaacaacttcccgtctgctcct
tctactcctggatctcctcaggccatcgcaggagctccatctcagtggcaaagaccgacc
agccccccctttgaaggccaaccccacgcactgcagagcaaaatggaggaccgtttggaa
gaggccatccacgtcctgcgcagccacgccgtgggccagagccccgccttagacgccgcc
cacagcgacatgcacggcctgctgccccccgtgcacaacgggggcctggggggcctgtct
ccggctttccccaacgccagcctcgcgctcagcaacagacatccggccatggggggcaaa
cacgaggaacccgccggacttcctcccagcagcactctgctgcacggtcaccacgcgtcc
ggacccacgcagcccgtcagccaatcagaaggcttcgccggtctccccgggggcttggct
cgctcctcgctctcgtccagcagctccgacatcaaacgagaagacaaggaggacgacgag
aactcctctgtggccgacaagtccgaggaggagaagaaggatcccaaagcggctcgcagt
cggacaagaaaggaggcgttgaccctccagatgttctctggactgtcagaccagaaagac
gacccggacaacgaggacgacgaggacattccccccgaggtgaagatggagcgcgagagg
gagcggcgagtggccaacaacgcccgggagcgcctgcgggtccgggacatcaacgaggcc
ttcaaggagctcgggaggatgtgccagctgcacctcagccacgacaagcctcagaccaaa
ctgctcatcctgcaccaagccgtcaacgtcatcctgaacctggagcagcaagtcagagag
cgcaacctcaaccccaaggctgcgtgtttaaaacggcgtgaggaggagaaggtgtccggg
gtgggggccgaggctcccatgcagctctcaggaggccaccccagcatgggcggagacggc
cacaaccccgtcggtcacatgtaa
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