KEGG   Oryzias melastigma (Indian medaka): 112146242
Entry
112146242         CDS       T07439                                 
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b
  KO
K09063  transcription factor E2-alpha
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112146242 (tcf3b)
Transcription factors [BR:oml03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    112146242 (tcf3b)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 112146242
NCBI-ProteinID: XP_024127720
LinkDB
Position
LG4:complement(3109550..3133330)
AA seq 627 aa
MSEQQRMAAVETDKELSDLLDFSAMFAPPVANGKNRTMTLASTHFAGSDERSGSASWTPA
EQNSPSFSQGRAYADGSHFSEHDGLSSPFISSGISGKADRPYPHFGSQPNFLPSDIAMPS
PDAMSPSGVKSASQFYPSYPNNPRRRPPEGGLEAQPKKIRKPPGLPSSVYVSTSGEEFTR
DGGGYTGAKPGAVYPGSFFMQEDPWSSSSSYSPMLGNIGQPGSFPAISPQDRMNYPLHST
EVNGFHTAPTTYNHTPTLNGESIMAAGRGTTASSSGDEIGKALASIYPSDHNSNNFPSAP
STPGSPQAIAGAPSQWQRPTSPPFEGQPHALQSKMEDRLEEAIHVLRSHAVGQSPALDAA
HSDMHGLLPPVHNGGLGGLSPAFPNASLALSNRHPAMGGKHEEPAGLPPSSTLLHGHHAS
GPTQPVSQSEGFAGLPGGLARSSLSSSSSDIKREDKEDDENSSVADKSEEEKKDPKAARS
RTRKEALTLQMFSGLSDQKDDPDNEDDEDIPPEVKMERERERRVANNARERLRVRDINEA
FKELGRMCQLHLSHDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSG
VGAEAPMQLSGGHPSMGGDGHNPVGHM
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgagcgagcagcagagaatggctgcagtggaaactgacaaggaactcagcgacctcctg
gatttcagcgcgatgtttgcgcctccagtcgccaacgggaagaaccgaaccatgactctg
gccagtacgcatttcgctggatcagatgaacgcagcggatccgcgtcctggacccctgcc
gaacagaacagcccctccttcagccaaggacgggcctacgcagatggaagccacttcagc
gaacacgacggcctgtcctctcccttcatcagttcagggatttctggtaaagccgaccgg
ccgtatcctcacttcggaagtcagcctaacttcctccccagtgacatagcgatgcccagc
ccggacgccatgtccccgtctggcgtgaagtccgcctctcagttttacccgtcctacccc
aacaaccccaggaggaggccgcctgaaggaggtttagaagcccagcccaagaagatccgg
aaaccccccggcctgccgtcctcggtttacgtttccacgtcaggggaggagtttaccaga
gatggcggaggatacacgggcgccaagcccggcgccgtctatcccggctccttcttcatg
caagaagacccctggtcctcctcctccagctactcccccatgctggggaacatcggacag
cccggctccttccccgccatcagcccccaggacagaatgaactaccctctgcatagcacc
gaagtcaacggcttccacacagcccccaccacctacaaccacacacccaccctcaacgga
gagagcattatggcggccggccgaggcaccacagccagcagctcgggggacgagatcggg
aaggcgctggcctcgatttacccgtctgaccacaacagtaacaacttcccgtctgctcct
tctactcctggatctcctcaggccatcgcaggagctccatctcagtggcaaagaccgacc
agccccccctttgaaggccaaccccacgcactgcagagcaaaatggaggaccgtttggaa
gaggccatccacgtcctgcgcagccacgccgtgggccagagccccgccttagacgccgcc
cacagcgacatgcacggcctgctgccccccgtgcacaacgggggcctggggggcctgtct
ccggctttccccaacgccagcctcgcgctcagcaacagacatccggccatggggggcaaa
cacgaggaacccgccggacttcctcccagcagcactctgctgcacggtcaccacgcgtcc
ggacccacgcagcccgtcagccaatcagaaggcttcgccggtctccccgggggcttggct
cgctcctcgctctcgtccagcagctccgacatcaaacgagaagacaaggaggacgacgag
aactcctctgtggccgacaagtccgaggaggagaagaaggatcccaaagcggctcgcagt
cggacaagaaaggaggcgttgaccctccagatgttctctggactgtcagaccagaaagac
gacccggacaacgaggacgacgaggacattccccccgaggtgaagatggagcgcgagagg
gagcggcgagtggccaacaacgcccgggagcgcctgcgggtccgggacatcaacgaggcc
ttcaaggagctcgggaggatgtgccagctgcacctcagccacgacaagcctcagaccaaa
ctgctcatcctgcaccaagccgtcaacgtcatcctgaacctggagcagcaagtcagagag
cgcaacctcaaccccaaggctgcgtgtttaaaacggcgtgaggaggagaaggtgtccggg
gtgggggccgaggctcccatgcagctctcaggaggccaccccagcatgggcggagacggc
cacaaccccgtcggtcacatgtaa

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