Oryzias melastigma (Indian medaka): 112146906
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Entry
112146906 CDS
T07439
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00514
Other types of O-glycan biosynthesis
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112146906 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112146906 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112146906 (lfng)
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
112146906 (lfng)
Glycosyltransferases [BR:
oml01003
]
Glycan extension
O-Glycan
112146906 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
112146906
NCBI-ProteinID:
XP_024128733
Ensembl:
ENSOMEG00000024014
UniProt:
A0A3B3CV83
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Position
LG8:7439571..7447683
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AA seq
357 aa
AA seq
DB search
MLKNNGRKAAVSAACTAGLCLLLLLALLALQHPRAQVPEQVSQDGARPGNERKGFSAYFS
TLARARREVENPSAPPASGDPPPAEDISVEDVFIAVKTTKKFHQSRLKLLLDTWISRNAQ
QTYVFTDGEDEELKKKIGSHAVNTNCSAAHSRQALSCKMAVEYDKFIESGKKWFCHVDDD
NYVNARALVKHLSQYQHTQDMYIGKPSLDRPIEATERLGDNKMKPVNFWFATGGAGFCVS
RGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVHLTRSNLFHSHLENLQQVS
RSEIHKQITLSYGMFENKSNIISLKGAFSVEEDPSRFKSVHCLLYPDTPWCPPQVAF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaataacgggaggaaggcggccgtgtccgccgcctgcacggcggggctctgc
ctgctgctgctcctcgcgctcctcgccctgcagcatccgcgcgctcaggtgcccgagcag
gtgagccaggacggcgcgcgcccgggaaacgagaggaaaggattttcggcgtatttcagc
acactggcgcgcgccaggagggaagtggagaatcccagcgcaccgccagcatcgggagat
cctcctccggctgaggacatcagcgtggaggacgtcttcatcgcggtgaagaccaccaag
aagttccaccagtccaggttgaagctgctcctggacacgtggatctccaggaatgcgcag
cagacgtatgttttcaccgatggagaggatgaggagctgaagaagaaaattgggagtcat
gcagtcaacaccaactgctctgcagctcacagccggcaagcgctctcctgcaagatggcg
gttgaatacgacaagttcatagaatctggaaaaaagtggttctgccacgtagacgacgac
aactacgtgaacgctcgggctctggtgaagcatctgtcgcagtaccagcacacccaggac
atgtacatcggcaaacccagtctggaccggcccatagaggccacggagaggctgggggac
aataaaatgaaaccggtcaacttctggtttgcgactggaggggcgggtttctgcgtgagc
cgaggtctggctctgaagatgagtccgtgggccagtggaggtcactttatgaacacggcg
gagaaaatccgacttcccgacgactgcaccatcggctacatcatcgagtcggttctcggg
gtccatctgacccgcagcaacttgttccactcccacctggaaaaccttcagcaggtgtcc
agatcggagattcacaaacagatcaccctcagttatgggatgttcgagaacaagagtaac
atcatcagtttgaaaggggctttttctgtggaggaggatccatcgaggttcaagtctgtg
cactgtctcctgtacccagacactccgtggtgtcccccccaggttgccttctag
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