Oryzias melastigma (Indian medaka): 112147005
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Entry
112147005 CDS
T07439
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
oml04510
Focal adhesion
oml04540
Gap junction
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112147005 (pdgfab)
04020 Calcium signaling pathway
112147005 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112147005 (pdgfab)
04540 Gap junction
112147005 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112147005 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112147005 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112147005 (pdgfab)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Growth factors (RTK binding)
112147005 (pdgfab)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Growth factors/receptors
112147005 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
112147005
NCBI-ProteinID:
XP_024128886
LinkDB
All DBs
Position
LG8:11956857..11976909
Genome browser
AA seq
252 aa
AA seq
DB search
MKTLQSSAGFEPQLPKACLRFQLNALRGPPGWMTCCSQLAAEVQEAKFPQELIDRLSRSE
IHSISDLQRLLEIDSVGTGNDVIEEHKHHKHHNHHKNFSRHHGYFNDLKSSQLHSRRKRS
LVEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKH
YRRVKVAKVEYIRRKPKLKEVLVWLEDHLECVCTSQHHVLEHSDADTGHRRAKGKKRKPK
ILRPSKDLLVTK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttacaatcttctgcaggttttgaaccccaactccccaaagcttgtcttagg
ttccagctgaatgcactcagaggaccaccgggctggatgacctgctgctcccagctggct
gctgaggtgcaggaagcgaagttcccccaggagctgatagaccgactgtcccgcagtgaa
atccacagcattagcgacctccagcggctactggagattgactccgtaggtacgggaaac
gatgtcattgaggagcacaagcaccacaaacaccacaaccaccataagaacttctctcgc
catcacggttacttcaacgacctgaagagctcgcagctccacagccgacgcaagaggagc
cttgtcgaggaagcagtcccggcggtgtgtaagacacggactgtgatctatgagatcccc
aggagccaagtggatcccacctctgccaacttcctgatatggccgccctgtgtggaggtg
aaacgctgcacgggctgctgcaacaccagcaacatgcgctgccacccatcccgcaagcat
taccgcagagtgaaggtagccaaggtggagtacatcaggaggaaacccaagctgaaagaa
gtccttgtgtggttagaagaccacctggagtgtgtgtgcacatcgcagcatcatgtatta
gagcactcagatgcagacacaggccatcgtagggctaaaggtaaaaaaaggaaacctaaa
atactaaggcccagcaaggacttattggtgacaaaataa
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