Oryzias melastigma (Indian medaka): 112147447
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Entry
112147447 CDS
T07439
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04081
Hormone signaling
oml04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112147447
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112147447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112147447
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112147447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
PDC10_C
Motif
Other DBs
NCBI-GeneID:
112147447
NCBI-ProteinID:
XP_024129620
Ensembl:
ENSOMEG00000019051
LinkDB
All DBs
Position
LG17:complement(18904991..18929647)
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AA seq
1001 aa
AA seq
DB search
MQPGKMVAVQPSPSSSPSAEWICCLDKRPSERSGEDVDIILTRLREVKAFHRFPPPLLLQ
ICACAFYECLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVSRETSELLRIEQREFKTLWEKYRQSLAGLLAPPYGAMESGSNNDRL
TDKDNMNSESGSKAHNKIPSEKLQRAGKVLRNAILSRAPHMIRDRKYHLKTYRQCCVGTE
LVDWLVMQSACVLTRSHAVGMWQVLLEEGVLNHVDQELGFQDKYLFYRFLDDEDEDTPLP
SEEEKRESEEELPETILFLAQIGPDALLRMILRKSPGQRTGDDLEIIYDELLHIKALAHL
SNTVKRELASVVIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDD
FGKLALVTDSPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEQSVLVLEKS
PRASTLGGIKYTVISGTPEKILEHFLEAMRLDIHHNEPDPAVDDFVLMHCVFMPNSQLCP
LLMAHYHAASPPGSEQERLEYALNCKRRVLILALRWANAHTYLLQEEPAAVSFLEELYGS
VSNDSRILRGLKDLAVDLEKVVKLHSEEAKSTKRKTLIRQFSNGEERLQKKQPIKNQDDI
LLKVYCSDHTYTTIRIAVAATGREVISAVTDKLGTTDELLLVHLSSASEKQILKPNDVSV
FSTLSINGRLFACPRDQLSGLTPLPDQEGPSAGSMSTFELMSSKDLAYQMTMFDWELFSC
VHEHELLYHTFGRQSFRRTTANLDLFLRRFNQVQLWVVTEVCLCNQLSKRVQLLKKFIKI
AAHCREFKNLNSFFAIIMGMSNPAVSRLSQTWEKLPTKFKKFYAEFESMMDPSRNHRTYR
ITVTKLEPPIIPFMPLLLKDMTFTHEGNKTFIDNMVNFEKMRIIANTIRQVRHCRSQPFN
PDICQPNKNQAEVRGYVRKLCVIDNQRALTQLSYRLEPRRT
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggggaagatggtcgcggtgcagccgtcccccagttcgtctccatcggccgag
tggatctgctgcctggacaaaaggccgtcggagcgctctggagaggatgtggacattatt
ctgacgagactgcgagaggtcaaagccttccacagatttccacctccactcttactacag
atttgtgcctgtgctttctacgaatgcctggaaaaaggaatcacattgtttcgacagggt
gatattggcaccagttggtatgcagttctttctggatccttggatgtgaaagtatcagaa
actgccaatcaccaggatgccgttacaatctgcaccctggggattggaacggcgtttggc
gagtccatcctggacaacacgcctcgccacgctaccatcgtcagccgagagaccagtgag
cttctccggattgaacagagagagtttaagaccctctgggagaagtatcgtcagagtctg
gctggactgttagcacccccgtatggagccatggagagtggatcaaacaatgacagactt
acagataaagacaacatgaactcagaatctggaagcaaagctcacaacaagattccatca
gaaaagctccagagagcaggaaaggtgcttcgcaacgccatcctatcaagggcgccccac
atgatccgagacagaaagtaccaccttaaaacatacagacaatgctgtgtaggaacagag
ctggtggactggttggtgatgcagagcgcctgcgtgctcacaaggtcccatgctgtagga
atgtggcaagtgctgctggaggaaggggtgctcaatcacgtggaccaggagctgggcttc
caggacaagtacctcttctatcgctttcttgatgacgaagatgaggacacgccattgcct
agtgaggaagagaagagagagagtgaggaggagttaccagaaaccatcctcttcctcgct
cagattggccctgacgcactgctgcgcatgatcctcaggaaatcgcctggtcagaggacc
ggggatgacttggagatcatctatgatgagctgcttcacatcaaggccttagctcacctc
tccaacactgtgaagcgtgaactggcgagcgttgtgatcttcgaatcccatgcaaaagcc
ggaactgtgttgtttaaccaaggagaggagggcacatcgtggtacatcatcctgaaaggc
tccgttaatgtggttatctatggcaagggagtggtttgcactcttcatgagggagacgac
tttgggaagttagctctggtcacagactcacctcgtgctgcctccatcgtcctgagagag
gacaactgtcacttcctccgcgtggataaggaagacttcaacaggatactcagggatgtg
gaagctaacacagtgcgtttgaaagagcacgaacagtctgtgctggttttagaaaagagt
ccccgagcgtccacactgggaggcatcaaatacactgtgatatcaggaacaccagagaaa
atccttgagcacttcctggaagctatgagacttgacatacatcacaatgaaccagacccg
gcggtggatgattttgttttgatgcactgtgtgttcatgcccaacagccagctgtgccct
ctgttgatggcacactaccatgctgcgtccccgcctggctccgaacaggagaggctggag
tacgcactcaactgtaagaggagagttctaattctggctctgcgctgggcaaacgcacac
acctacctgctgcaggaggaacctgctgccgtctcctttttggaggagttgtacggaagt
gtatcgaatgattctcggatactaagaggtctcaaagacttggctgttgatctagagaag
gtggtgaagttacactctgaagaagctaaatcgacaaaaaggaaaactctgatacgacaa
ttcagcaatggagaggaaagactccaaaagaaacagcccatcaagaatcaggatgacatt
cttctgaaggtgtactgcagcgatcacacctatacaacaattcggattgcggtggccgca
acaggcagggaagtgatcagcgcggtgaccgacaaactcggcacaactgacgagcttctc
ctggtgcacctcagctctgcctctgagaagcagatcctgaaacccaatgacgtatcagtg
ttctccactttaagcattaacggcaggttgtttgcttgtcctcgagatcagctcagtgga
ttgactcctcttccagatcaagaaggtccctctgccggctccatgtcaacttttgagctg
atgagctccaaggatctggcttatcaaatgacaatgtttgactgggagctctttagctgt
gtacatgagcatgagctgctttaccacacattcggtcggcagagcttccggagaaccacg
gctaatctcgatctgttcctgcggaggttcaaccaggttcagctgtgggtggtcactgaa
gtctgcctctgtaatcaactcagcaaacgagtgcagctcctcaagaagttcatcaagatt
gctgcacactgtagggagttcaagaatcttaattcattctttgccatcatcatgggaatg
agcaaccctgctgtcagcagactgagccaaacgtgggagaaacttcccaccaagtttaag
aagttctacgctgagtttgaaagcatgatggatccatctcgaaatcacaggacttacaga
attactgtcaccaaactggaaccaccaatcatccctttcatgccacttctactcaaagac
atgacatttacccatgagggcaacaagacctttattgacaacatggtaaattttgagaaa
atgcggatcattgcaaacacgattcgtcaagtgaggcattgtcgaagtcaaccattcaac
cctgacatttgccagccgaacaagaatcaagcggaggtgcgtggctacgtaaggaagctc
tgcgtgatcgacaaccagagggcgttgacccagctctcctaccggctggagccccgacgg
acatga
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integrated database retrieval system
