Oryzias melastigma (Indian medaka): 112147558
Help
Entry
112147558 CDS
T07439
Name
(RefSeq) C-X-C chemokine receptor type 4 isoform X2
KO
K04189
C-X-C chemokine receptor type 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03250
Viral life cycle - HIV-1
oml03260
Virion - Human immunodeficiency virus
oml04020
Calcium signaling pathway
oml04060
Cytokine-cytokine receptor interaction
oml04144
Endocytosis
oml04672
Intestinal immune network for IgA production
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112147558
03260 Virion - Human immunodeficiency virus
112147558
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112147558
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112147558
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112147558
09142 Cell motility
04810 Regulation of actin cytoskeleton
112147558
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112147558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oml04030
]
112147558
04050 Cytokine receptors [BR:
oml04050
]
112147558
04090 CD molecules [BR:
oml04090
]
112147558
G protein-coupled receptors [BR:
oml04030
]
Rhodopsin family
Chemokine
CXC Chemokine
112147558
Cytokine receptors [BR:
oml04050
]
Chemokine receptors
CXC Chemokine
112147558
CD molecules [BR:
oml04090
]
Proteins
112147558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
TAS2R
CNNM
7TM_GPCR_Srsx
DUF5568
Motif
Other DBs
NCBI-GeneID:
112147558
NCBI-ProteinID:
XP_024129830
Ensembl:
ENSOMEG00000011306
LinkDB
All DBs
Position
LG17:23405911..23407404
Genome browser
AA seq
369 aa
AA seq
DB search
MSYYEHFVLDYDSNDTGSGSGLGSGEVGVDLEEPCGMEHLMTAELQQVFLPVVYSLIFIL
GITGNGLVVLVLGCQRRSKCSLTDRYRLHLSAADLLFVLALPFWAVDAALADWRFGAATC
VGVHVIYTVNLYGSVLILAFISLDRYLAVVRATDTNSGGLRQLLAHRLVYVGAWMPAGLL
AVPDLIFARTQEGGEGSTLCQRFYPDDNAPLWVAVFHLQLVLVGLVIPGLVLLVCYCVIV
TRLTRGPLGGQRQKRRAVRTTIALVLCFFICWLPYGAGISVDALLRLEVLPRSCRLEAAL
GVWLSVAEPMAFAHCCLNPLLYAFLGAGFKSSARRALTLSRASSLKVLPRRRPGASTTTE
SESSSLHSS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactatgagcatttcgttctggattacgactcaaatgacacaggctctggttct
ggtttgggttctggggaagtgggtgtggatctggaggagccctgtgggatggagcacctg
atgacagcggagctccagcaggtcttcctgccggtggtctactcactcatcttcatcctg
ggcatcacggggaacgggctggtggtgctggtgctgggctgtcagcgcaggtcaaagtgc
agcctgacagaccgctaccgcctccacctctctgctgctgatctgctcttcgttctggcg
ctgcccttctgggctgtagacgccgctctggctgactggcggtttggagcagcgacctgc
gttggcgtgcatgtgatctacacagtcaacctgtatggcagcgttcttatcctggcgttc
atcagcctggatcggtatctggcagtggtccgagccacagacacaaacagtggtggtctg
agacagctgctggcacacaggctggtgtatgtaggagcatggatgcctgccggtctgctg
gcagtcccagatctgatctttgcccgaactcaggaaggaggagaaggctccactctgtgc
cagagattctacccagacgacaacgctcctctgtgggtggcagtcttccacctccagttg
gtgctggtgggtcttgtgatccccggcctggtgctcctcgtgtgttactgcgtcatcgtc
accaggctgacccgcggccccctcggtggccagcggcagaagcggcgtgccgtcaggacc
accatcgcgctggtgctctgcttcttcatctgctggctcccttacggagcgggcatctcc
gtggacgctctgctgcgcctggaggtcctgccgcggagctgcaggctggaggctgcctta
ggggtgtggctttcagtggctgagcccatggcctttgcacactgctgcctgaacccactg
ctgtacgccttcctcggcgccggattcaagagctcggcacggagagccctcaccctgagc
cgggcctccagtttaaaggttttaccccgaagacgccctggagcctctacgacaacagag
tccgagtcctccagtctacattccagctag
DBGET
integrated database retrieval system
