Oryzias melastigma (Indian medaka): 112148307
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Entry
112148307 CDS
T07439
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112148307 (exd2)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
112148307 (exd2)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112148307 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Motif
Other DBs
NCBI-GeneID:
112148307
NCBI-ProteinID:
XP_024131083
Ensembl:
ENSOMEG00000023552
LinkDB
All DBs
Position
LG22:699460..704591
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AA seq
651 aa
AA seq
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MSYRAPLTAAITTVLGAAVGGLLLWRVYSSKRRKLPPDQEVADPAGAPHPNQEGLLDLHL
PSTERAARPAGTGPSGAPPAVQTAPCEPLPALKPVLVSCEDEWQQLWPRMQEELSVLPVL
GLDCEWVTIRNRPRRCTRSQVLTRLLVPLQVSVKGRASEVSLLQMSSYSGLCALVRLLAF
RDGQQAFPLSFVELLRDPKVLKVGVGCYEDGKRLTRDHGLLLACTVDLRYLALRQRRTPA
DNGLSLKSLAAELLNFPLDKSPALRCSDWEADQLTPNQVTYAARDAQVAVALFLHLLGLR
VGAGPAPFSELASRCQGLVDVPFRARGDGEDGAAGGEKRRRSKKPTVYESPESGDQRVPD
PRRNRRKPLGADYSARKSPLYDNCFLYAPDGQPLCTCDKKKARWYLNKGIGVLQSEDPFV
VRLLFEPSGRPESQHDYYLTEKENLCVVCGKADSYIRKNIVPHEYRRHFPTELKDHNSHD
ILLLCTACHAASNVHDGVLKQLLADEFSAPQGCEEGVRVWEDSDRRRVRSAARALLSSGD
GLPEQRREELQLLIKKFLNTEEGAELTEEELQEAASLETRILNEAYVPHGLKVVRAHAQR
GLRGLMELERRWRQHFLSSMQPRHLPPLWSIDHNHSKFLRRYGAELPINLN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccgagcgcctctcaccgccgccatcaccacggttctcggggcggccgtcggc
gggctgctcctgtggcgagtctacagctccaagaggaggaagctgcctcccgaccaggag
gtggccgatcccgctggagccccccaccccaaccaggaggggcttttagacctgcatctg
ccctccacagagagggcggcgaggcccgccggtaccgggccctccggagcgccccccgct
gtccagacggcgccgtgcgagccgctgccggcgctgaagccggtgctggtgagctgtgag
gacgagtggcagcagctgtggccgcggatgcaggaggagctgtcggtcctccccgtcctg
gggctggactgtgaatgggtaaccatccggaacagacccagacgctgcacccggtcccag
gttctgacccggctgctggttccgctgcaggtgtcggtgaagggccgggcctcggaggtg
tcgctgctgcagatgtcctcgtactccggcctgtgcgctctggtgaggctgctggcgttc
cgggacggccagcaggcgttcccgctcagcttcgtggagctgctgagagacccgaaggtc
ctgaaggtcggcgtgggctgctacgaggacgggaagcggctgacgcgcgaccacggcctg
ctgctggcctgcaccgtcgacctgcgctacctggcgctgaggcagaggagaacgccggcg
gacaacggcctgagcctgaagtctctggctgcagagctgctgaacttccctctggataaa
tctccggcgctgcgctgcagcgactgggaggcggatcagctgacgcccaatcaggtgacc
tacgcagccagagacgctcaggtcgccgtggcgctcttcctccacctccttggcctccgg
gttggagctggccccgcccccttctcagagctggcctcccgctgccagggtctggtggac
gtcccgttccgcgccagaggcgacggggaggacggcgccgcgggcggagagaagaggagg
aggagcaagaagccgacggtttacgagagtccagagtctggagatcagcgagtcccagac
ccgcggcggaaccggaggaagccgctgggcgccgactactcggccaggaagtctcctctc
tacgacaactgcttcctgtacgcgcccgacggccagccgctctgcacctgcgacaagaag
aaggccaggtggtacctgaacaaagggatcggagtcctccagagtgaggacccgttcgtg
gtgaggctgctgttcgagccgtcggggcgtcccgagtcgcagcacgactactacctgacc
gaaaaggagaacctgtgcgtcgtctgcggcaaggccgactcctacatcaggaagaacatc
gtcccgcacgagtaccggcgccacttccccaccgagctgaaggaccacaactcccacgac
atcctgctgctctgcaccgcctgccacgccgcctccaacgtgcacgacggcgtcctgaag
cagctgctggccgacgagttctctgccccccagggctgcgaggagggcgtccgcgtgtgg
gaggactcggaccggcggcgtgtgcgctcggcggcgcgtgctctgctcagcagcggagac
gggctgccggagcagcggagggaggagcttcagctgctcatcaagaagttcctgaacacg
gaagagggggcggagctaacggaggaggagctgcaggaggccgccagcctggagaccagg
atcctgaacgaggcgtacgtccctcacggcctgaaggtggtgcgcgcccacgcccagcgg
ggtctccggggcctcatggagctggagcgccgctggcggcagcacttcctgtccagcatg
cagcctcgccacctgccccccctgtggtccatcgaccacaaccacagcaagttcctgcgc
agatacggggcggagctccccatcaacctgaactga
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