Oryzias melastigma (Indian medaka): 112149430
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Entry
112149430 CDS
T07439
Name
(RefSeq) homeobox protein otx5 isoform X1
KO
K09337
cone-rod homeobox protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112149430
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112149430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
DUF5930
Motif
Other DBs
NCBI-GeneID:
112149430
NCBI-ProteinID:
XP_024132866
Ensembl:
ENSOMEG00000018323
LinkDB
All DBs
Position
LG13:complement(19425060..19428186)
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AA seq
300 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHTAAVGYPSCFSGTPRKQRRERTTFTRAQLDILEA
LFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQSKPRPPKKKASP
ARETNAEAAANATNGPYSPPPPPPGTAITPSSSSASATVSIWSPASISPLPDPLSASTTP
CMQRTTTYPMTYTQAPAYSQSYAGSSSYFTGLDCSSYLSPMHPQLSGTGGALSPITASSM
GGPLSQSPASLSSQGYTAASLGFGAVDCLDYKDQAAWKLNFNAADCLDYKDQNSWKFQVL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaaacagccccattacgccgtcaacgggttaacgctgtccggcccc
ggcatggatctgctccacaccgccgccgtcgggtacccaagttgtttttcaggcactcca
cgcaaacagcgccgtgaacgcaccactttcacgcgtgcgcagctggacatcctggaggct
ctgttcgccaaaacccgctacccggacatcttcatgagggaggaggtggccctaaagatc
aacctcccggagtccagagttcaggtttggttcaagaaccggcgggccaagtgccgccag
cagcagcagcagagcacaggccagtccaaacccaggcctcccaaaaagaaggcatcgcca
gcacgtgagaccaacgccgaggccgccgccaacgccaccaatggaccatacagccccccg
cccccacctcctggcactgccatcacccccagctccagctctgccagtgctactgtgtcc
atctggagccctgcctccatctccccgttaccagaccccctgtctgcctccaccaccccc
tgcatgcagcgcaccaccacttaccccatgacctacacccaggccccggcctacagccag
agctacgccggctcctcctcctacttcaccggcctggactgcagctcctacctgtctccg
atgcacccgcagctgtccgggaccggaggggccctgagccccatcacggcctcgtccatg
gggggcccactcagccagtccccggcttccctgtcttcccagggctacacggccgcctcc
ctgggttttggagctgtagattgtctggactacaaagatcaagctgcctggaagctgaat
ttcaatgcagctgactgtctggactacaaagaccagaactcctggaagttccaggtcttg
tag
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