Oryzias melastigma (Indian medaka): 112149986
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Entry
112149986 CDS
T07439
Name
(RefSeq) fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00515
Mannose type O-glycan biosynthesis
oml01100
Metabolic pathways
Module
oml_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112149986
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112149986
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149986
Glycosyltransferases [BR:
oml01003
]
Glycan extension
O-Glycan
112149986
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112149986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
112149986
NCBI-ProteinID:
XP_024133788
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Position
LG13:complement(16056566..16060738)
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AA seq
532 aa
AA seq
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MRISFCQGLLTAAIVLNLLILYYVSRAQQQMMEKRNELGRGSRRAVLPASGLGGGLVVAG
GAGGDRVLVGVEGHGRSARVTVLLREFENFENFVGDVANSFLHQRADLPFLAVADVPPYP
PLVLPEGARLLVLSPSPDQPPQAHRPEFHVQTEFVFLVPDGVELEQPRVIERLIRELEGE
GGGPVRMVAAPVLVRSAVQCLHLRVNLREWTATYSPAASGSSGSVCTALQGDAVVLMRTE
DLFNLSVPLSRPLFPALFIQTALRGWKVKLLESPCFSATHRPLFSSAHNQWKADTRMKEA
TNKLMKSFGVKRLLLPDGKEQWFGCSKETPRCFGTVQDDTPDYLYLERWTPPCCLRALRE
TTKYVINILESSGVRYWLEGGSLLGAVRHQDIIPWDYDVDLGIYLEDVPNCDHLKNLDSG
SLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWTDHKQDVEFPEH
FLQPLVPMPFAGITAFGPNNHKAFLELKFGEGVIENPQYPNPGKKRLDRSKL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattagtttctgccaaggcctgctgactgctgccatcgtcctgaacctcttgata
ctctactatgtgtctcgagcccagcaacagatgatggagaagaggaacgagcttggccga
ggatccagacgggctgttttgccggcctctgggcttggaggaggtctggtggtcgcaggg
ggggctggaggagatcgtgtattggttggagttgaaggacacggtcgaagtgcccgggtg
actgttctgctgcgggagtttgagaactttgaaaacttcgtgggagacgtggcaaattct
ttcctccatcagagagctgatcttcccttcctggccgtggctgacgtgcctccgtatcct
cctctggtgcttcctgaaggcgctcggctgctcgttctctcccctagcccggaccagccg
ccccaagctcacaggccagagtttcatgtccaaacagagtttgtgttcctggtccctgat
ggagtggagctggaacaacctcgtgtgatagagaggctcatcagggagctggaaggcgag
ggcgggggtcctgtgcggatggttgctgcacctgtgttggtccggtcagccgtgcagtgc
ctccatctgcgagtgaacctcagggagtggacggccacctactcaccagccgcgtctgga
agcagcgggagtgtctgtaccgcattacaaggcgatgctgtggtcctaatgcgcaccgag
gatctttttaacctctctgtccccctgagtcgccctctttttccagcacttttcattcag
actgccctgagaggttggaaggtcaaactcctggaaagcccctgtttttcagcaacccac
cgtccacttttcagctctgcgcacaaccagtggaaagcagacactcggatgaaggaggct
acaaacaagctcatgaagagttttggtgtaaagcgcctcctgctgcctgatgggaaggag
cagtggtttggctgtagtaaagaaacacctcgctgctttggcactgtgcaggatgacacc
ccagactacctttatttagagcgctggacacccccctgctgcttgcgagcgctcagagaa
accacaaaatacgttattaacatcctggagagttctggtgtgcgctactggttggaagga
ggttctctgcttggggccgttcgccatcaagacattatcccgtgggattacgatgtggac
ctggggatctatctggaggatgtgcccaactgtgatcacctgaagaacctggattcgggc
tccttggtggatgcgaacggttacgtgtgggagcgcgctgtggaaggagacttttaccga
gtccagtacagtgaggccaaccacttacacgttgacctgtggcctttctacccgcgcaac
ggcgtcatgaccaaagacacgtggacggaccacaagcaagacgtggagttcccagaacat
ttcctgcagcctctggtgcccatgcctttcgccggtatcacggcttttggccccaacaac
cacaaagctttcttggagctgaagttcggagagggggtgattgagaaccctcagtacccc
aacccaggtaaaaagaggctggacagaagcaagttatga
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