Oryzias melastigma (Indian medaka): 112150557
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Entry
112150557 CDS
T07439
Symbol
ptprc
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112150557 (ptprc)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112150557 (ptprc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112150557 (ptprc)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oml04090
]
112150557 (ptprc)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112150557 (ptprc)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112150557 (ptprc)
CD molecules [BR:
oml04090
]
Proteins
112150557 (ptprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
DSPc
Y_phosphatase3
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
112150557
NCBI-ProteinID:
XP_024134723
Ensembl:
ENSOMEG00000004815
LinkDB
All DBs
Position
LG4:14257748..14278894
Genome browser
AA seq
1330 aa
AA seq
DB search
MAGVLGLKIVLLLGGIIALVSCQDTASESVSTSPPLTGAAATATPSDSSPSLATLQGNSS
KSSFPTTNPTTTIVSTPPRTEAAATAKTNTTTVLTRSSTPPSPSSNSSIQGTISPNISVT
SPSGISNTTRPTLSPSSQSDSSQNLTSPAVTQNTTITTSPAPPQCSYNVKKIKFGLQFQM
NYTIFKEYHISVNDGNNLKNRSCNENTTCSITGLKPCTDYTVIVNAQWNDTEIFCPSSEN
KVTTESAAPDDIKVSKHRPGHVCYQSDWDISNSLSTPDRNKTEKSNGSVCFKLKKDDFCS
SFTVDIKSESCETINITKDITIDFIDPAEIDEPKPTKLPVRFEPKLPPNCKNLTVEYTCL
ETRLPGNRMNLSVLEPYTDYNCTGEIKNETFVFIRTPPVIFNIDCGFNIKVTSTSDNTSI
QLDWTSTNSSCGVDLPKLSYICSCDTKNQIKSRVESCVFTGLEPYTDYTCEVHPKYNDKK
VNQGWREEVQTDAGVPTTVEKLRLTVPENNVIDVECDEPKKLYGPKREYKARLHDSNGFV
KEEKSLRCYFPFKDLSYSTTYRVEVTVYNGAHESPAAIESVNTSYNDKAVIGFLVFLIII
TSVALLLVVYKIYVLKRKNSHDMGESMNLIEKGSDEENLMTVDPIAAEVLLETYKRKLAD
EGRLFLAEFQSIPRIFSRYSVKEAKKHFNGPKNRYVDILPYDHNRVQLSTGNGEPGCDYI
NASFIDGYKEPKKYIAAQGPKDETVSDFWRMVWEQQSSIIVMVTRCEEGNRVKCAQYWPS
QDRETEIYEEFIVKLTSEKEFPDYTIRHLRLTNKREKNSEREVTHIQFISWPDHGVPGEP
QLLLKLRRRVNAFKNFFSGPIVVHCSAGVGRTGTYIGIDAMMEGLEAEGRVDIYGYVVRL
RRQRCLMVQVEAQYILIHQALLEHNQFGETEISLSELHSTVSTLKQGPPESESTLMEEEF
ERLPSFKTWRTCNTGVTEENKAKNRCESVIPYDYNRVLLRLDEGRSHDSDPDEDEEEESS
DEEEEESAKYINASYIDGYWDQHAFITTQTPLPDTVNDFWQMIYQKRVPNVVMLSECEKD
DKDCESVYWDKEKKTFGYIEVEVTNTETFPAFVYRTMKIRHIKRSEVREVNHVQFLKWDK
ELPEKPQDLIDMIKHVKSNCGSGKSQKGMPVLAHCNDGSTRSGVFCALWNLLDSAENEKL
VDVFQVVKTLRKERQKMISSLEQYTFLYSALESTYPVQNGEAKPVQATGGASVQVINETK
AEEQQSEKAAERPASTTSNDQQAAAESSPVEAEAAKEDSKEEPEKEVSNGPTEAVPVEDT
SNGPTVTVEV
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgtccttggtttgaagattgtgctcctcttgggcgggatcatcgctttggtc
agctgtcaagatactgcatctgaatcagtgtccacctcacctccactcactggggcagca
gctactgccacaccctcagactcctccccctctctcgcgactctgcaagggaactcttca
aagtcctcttttccaacaactaatccaaccaccaccattgtctccactcctccacgcact
gaggcagcagctactgccaaaactaacactacgactgtcctcactcgttcttccaccccg
ccaagcccctcctcaaactcctcaattcagggaacaatttcacccaacatctccgtcacc
tctccttcaggcatctcaaacacaacccgacccacactcagcccatcctctcagtctgac
agctctcagaacctgacctcacctgcagtcacccagaacaccaccatcacgacatcccca
gcaccccctcagtgttcttacaatgtcaaaaagatcaagtttggcctccagtttcagatg
aattacacgattttcaaggaataccacatttctgtaaatgatggaaacaatttaaaaaat
cggtcctgcaatgaaaacacaacctgtagcatcacaggtctgaagccctgtactgattat
acagtcattgtcaacgctcaatggaatgatacagaaatattctgtccgagttctgaaaat
aaagtgaccacagaatctgcagctcctgatgacattaaagtcagcaaacaccgccctgga
catgtttgttaccaaagtgattgggacatcagcaattctctgtcaacaccagacagaaat
aagactgagaagtctaatggatctgtctgttttaaactgaagaaggacgacttttgctca
agtttcactgtggatatcaagtcagaaagctgtgaaacaattaacatcaccaaagacatc
acaatcgatttcatagatccagctgagatagatgagcccaaacccacaaaacttcctgta
aggtttgagccaaagttacctccaaactgtaaaaatctgacggttgagtacacctgttta
gaaacaagacttcctggaaatcgaatgaatctgtctgttctggagccctacactgactac
aactgcactggagagatcaagaatgaaacctttgtttttatcagaactccacctgtcatc
tttaacattgactgtggttttaatatcaaagtaacatccacatcagacaacacttctatt
caactggactggacatcaactaatagcagctgtggtgttgatctcccaaaactttcttat
atctgcagctgtgacacaaagaaccaaataaaatcaagagttgaatcatgtgtgtttact
ggactggaaccgtacactgattatacttgtgaagttcatcccaaatacaacgataagaaa
gttaatcaaggatggagagaagaagtgcaaactgatgctggagtcccaacaacagttgag
aaattgagactgacggttccagaaaataacgtcattgatgtagagtgtgatgagccaaaa
aagttgtatggaccaaagagggagtacaaagcacgtctccatgattctaatggttttgta
aaggaggaaaagagcttaagatgttacttcccattcaaagatttgagttactccacaacc
tacagagtagaggtgactgtctacaatggagcccatgagagccccgctgcgatcgaaagc
gttaacacttcctataatgacaaagctgttattggatttctggtcttcctcatcatcatc
acctctgtggctcttcttctggtcgtctacaaaatttatgttttgaagcgcaaaaattca
catgacatgggtgagagcatgaacctcattgaaaaaggaagtgatgaagaaaacttgatg
acagtggatccgattgccgcagaggttctgctggaaacttacaagaggaagcttgctgac
gagggacgacttttcctggctgagtttcagagcattccaaggattttctcaagatactcg
gtgaaagaagccaaaaagcatttcaatggccccaagaatcgctacgtggacatccttcca
tacgatcacaaccgtgttcagctgagcacaggaaacggagaaccaggatgtgactacatc
aacgccagcttcattgatgggtacaaggaacccaaaaagtacattgcagctcaaggacca
aaggatgagactgtgtcggacttttggaggatggtctgggagcagcagtcctctatcatc
gtcatggtgacgcgctgtgaggagggaaaccgggtcaaatgtgctcagtactggccctct
caagaccgagagactgagatctacgaggagtttattgtgaaactcacctcagaaaaagaa
tttccagattacaccatccgccatcttcgcctgactaacaaaagggagaagaactcagag
agggaagtgactcacattcagttcatcagctggccagatcatggcgtcccaggagagccg
cagctcctcctgaagctgaggcggcgcgtcaatgccttcaagaatttcttcagtggtccc
attgttgttcactgcagtgctggagtcggcaggacaggtacctacatcggcatcgacgcc
atgatggagggtctggaggcggagggcagagtggacatctacggttatgttgtcagactg
cgcaggcagagatgcctcatggttcaagttgaggcccagtacatcctgattcaccaggcc
ctgctggagcacaaccagtttggagaaacagagatcagtctgtcagagctgcacagcaca
gtgagcacgctcaaacaaggccccccagagtctgaatccaccctaatggaagaggagttt
gagagactcccctcctttaaaacctggaggacatgcaacacaggggtcacagaggaaaac
aaagcaaagaaccgctgtgaatccgtgattccatacgactacaaccgagtgctgctgagg
ttagatgaggggcggagccatgacagtgaccctgatgaagatgaagaggaagagtcatca
gacgaagaggaagaagagtctgcaaaatacatcaatgcctcctacattgacgggtactgg
gaccagcatgccttcatcacaacgcagacccccctcccagacactgtgaatgacttctgg
cagatgatttaccagaagagagtcccaaacgttgtaatgctctcagagtgtgagaaggat
gataaggattgtgagtctgtgtactgggataaagagaaaaagacttttggatacattgag
gtggaagttacaaacaccgaaacctttccagccttcgtctaccgcaccatgaagattcgc
cacatcaagaggtcggaggttcgggaggtgaatcatgtccagttcctgaagtgggacaaa
gagcttccagagaaaccgcaggacctcatagacatgatcaagcatgttaagagcaactgt
ggcagcgggaaatcacaaaagggcatgcctgttttagcccactgcaacgatggctccacc
cgctcaggggttttctgcgctctgtggaacttgctggacagtgctgagaatgagaagctg
gtagatgttttccaggtggttaaaactctgcgtaaagagagacaaaaaatgatctccagc
ctggaacagtacacgtttctgtatagtgctttggagagtacttatccagtccagaacgga
gaagcaaagccagtccaggccactgggggcgccagcgttcaggtcatcaatgaaaccaaa
gcggaagagcagcagagcgagaaagctgctgagagacccgccagcactaccagcaacgac
cagcaggcggcagcagagagcagccctgtggaggctgaggcagcgaaggaagacagcaaa
gaggagcccgagaaggaggtttctaacggccccacggaggcagtccccgtggaggacacc
agtaacggtcccactgtcactgtggaggtctaa
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integrated database retrieval system
