Oryzias melastigma (Indian medaka): 112152355
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Entry
112152355 CDS
T07439
Symbol
rxylt1
Name
(RefSeq) ribitol-5-phosphate xylosyltransferase 1
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00515
Mannose type O-glycan biosynthesis
oml01100
Metabolic pathways
Module
oml_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112152355 (rxylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112152355 (rxylt1)
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
112152355 (rxylt1)
Glycosyltransferases [BR:
oml01003
]
Glycan extension
O-Glycan
112152355 (rxylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
112152355
NCBI-ProteinID:
XP_024137643
Ensembl:
ENSOMEG00000022836
UniProt:
A0A3B3CUB9
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Position
LG6:complement(33682562..33688437)
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AA seq
439 aa
AA seq
DB search
MKIPKRKLFLLIIFAYVAFSLYAAYNVFFSNKTISRVHRVVKNSGAPAGGVRGGAAPFVA
DEWNPWEDEEVEYNSALNKKREAFKQYMSKIEKNKPKKYKVQIWGKAAIGLYLWEHILDG
SLNPTDKVAQWREGQLQSGKVDLSFYTGPAVVQGHVPLDMNSLVLVLNGREEQKVLYSTR
WLKHVQALVQSHTVSHVAVVLLGNEQCDNDWIAPHLKRNGGFVDLLFVVYDSPWVNDKDV
FQWPLGVATYREFPMIRANSQLITASRPYLCNFLGTVYKNSSREAMMHELKQSGLEKECI
IAARDKWLPQETADSLRRYQTALVQSELTLCPVGINTECYRIYEACSLGSVPVVEDVLTP
GRCAAGSSSPLRLLKAAGAPFIFISNWKELPAILEREKMMSQEQRVDRRRRLLEWYSGFR
RQMKERFTEAIEENFFKSG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccgaaaagaaagctgtttcttttgatcattttcgcatacgtggccttctcc
ctgtacgcggcgtataatgtctttttcagcaacaaaacgatttcccgcgttcaccgggtg
gtgaagaacagcggagcgcctgcgggcggagtccgcggcggcgcggcgccgttcgtggcg
gatgagtggaacccgtgggaggatgaggaggtggagtacaactctgctctgaacaagaag
agagaggccttcaaacagtacatgagtaaaatcgagaagaacaaacccaaaaaatacaag
gtccagatctggggcaaagctgcaatagggctttacctttgggagcacatcttagacgga
tccctcaaccccaccgacaaagtggcccaatggagagaggggcagctgcagtctggaaag
gttgatttgagcttctacacgggtccagccgtggtccagggccacgtccctctcgacatg
aacagcctggttttggttctgaacgggcgtgaggagcagaaggttctgtactccacgcgg
tggctgaagcacgtccaggctctggttcagtcgcacacggtgtctcacgtggccgtggtt
ctgctcggcaacgagcaatgcgacaacgactggatcgccccacatttaaagaggaacggc
ggcttcgtggacctgctgttcgtggtgtacgacagcccgtgggtcaacgacaaggacgtt
ttccagtggcctcttggcgttgcaacgtacagggagtttcccatgatccgagccaactcc
cagctgatcacagccagtcgaccgtatctctgtaacttcttaggtactgtttacaaaaac
tcttctcgagaagcaatgatgcacgagctgaaacagtctggcttggaaaaggaatgtatc
atcgctgccagggataagtggctccctcaggaaacggcggacagtctcaggcgctaccag
acggctctggtccagagcgagctcacgctctgcccggtgggcatcaacaccgagtgctac
cgcatttacgaggcctgctcgctcggctccgtccccgtggtggaggacgtcctgacaccc
gggaggtgcgccgccgggtccagctccccgctgcgcctcctgaaggcggcgggagcgccc
ttcatcttcatcagcaactggaaggagcttcccgccatcctggagagggagaagatgatg
agtcaggagcagagggtggaccggaggaggcggctgctggagtggtactccgggttccgg
cggcagatgaaggaaaggttcaccgaggccatcgaggagaatttcttcaaaagtggatga
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