Oryzias melastigma (Indian medaka): 112153289
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Entry
112153289 CDS
T07439
Symbol
ptcd3
Name
(RefSeq) pentatricopeptide repeat domain-containing protein 3, mitochondrial
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oml03029
]
112153289 (ptcd3)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112153289 (ptcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
TPR_24
PPR
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
112153289
NCBI-ProteinID:
XP_024139140
Ensembl:
ENSOMEG00000019243
UniProt:
A0A3B3DTR0
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All DBs
Position
LG10:complement(24342579..24351431)
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AA seq
660 aa
AA seq
DB search
MAASGRHVGHYIHRNGRFLRVNLDHLWANRSFGWTSALQQQAPEVNKDSSESIVIPRKKT
WSKTAVLEALASTVKRDPTAHPYQFQDDPYLAPRTSAEFRLFSLSQESGRSAAKFFVNNN
PKFFTKDFAEPHIPCLMPESVTLRLEEVSEEALKERISLRKVTAAVDMYDQLLQAGMAVS
METSHDLLDLVCLYCDKDPEQEEGPQGETGEEAKGRRGRMRRDFPKTLWKENNNAERIFN
LLPERDTRCYSALIRGMVKHGAPAKAFSLYTDLLNNRLTGDVHLFNALILAAPELREKYT
EKWDLISELLNQMSQQKVQPDLLTFNSVLKALRRCGYVAKTKALPTLSEMKAMGISPSLA
TYDHILAAFFKSASSGTSNIDILLEVLSELEGRSFTCQDPDDVLFFSSAMRVCLDGKDLE
LGYKVQTLVEVGDNWRLLGDSFQQSIYYGRFFHLLCMMENIDVVLEWYRKIIPSLYYPNP
QGMRDLLQALDTDSRLDMLPTIWKDIKSLGHDNKSELVEELLALMAREKHSPEVQESFAE
CALNVKSVCDGRPGTEWSASSLSYITTLLLRANKTQEAWEVLLVFKAKNRIPSEELLNSF
LSACHTTRDSRIAVELVQLSSAFCLPITSALASRALAEFNLTEEQRAVLSELEVAVESSD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccggtaggcacgtagggcattatatccacagaaacggacgttttctgcgg
gttaaccttgaccatttgtgggctaacaggagttttggatggacttctgcactgcaacaa
caagctccagaagttaataaagattcatcagagtcgattgtcatccccagaaagaaaaca
tggagcaaaactgcagttctggaagccctggcatcaactgtgaagagggatcctacagcc
catccgtaccagttccaggatgatccgtaccttgctcccagaacatctgctgagtttagg
ctgttttctctctcccaggagtccggtcgctctgctgccaagttcttcgtcaacaacaat
ccaaagttcttcactaaagactttgctgaaccccacataccttgtctgatgccagagagc
gtgacgctgcgtctggaggaggtgagcgaggaggccttgaaggagcgcatcagcctgagg
aaagtgacggctgctgttgacatgtacgatcagctcctgcaagccggcatggccgtttcc
atggaaacctctcacgacctgctggacctcgtctgtctgtactgcgacaaggaccccgag
caggaggaggggcctcagggggaaacgggagaggaggcaaaaggaagaagagggaggatg
aggcgagattttccgaagactttgtggaaagaaaacaacaacgctgagagaatcttcaac
ctgctgccagaaagagacacgcgctgctactctgctctaatcagaggcatggtgaagcat
ggagctcctgcaaaagctttcagtttgtatacagatctgctgaacaacagactgacaggt
gacgtccatctcttcaacgctctcatcctcgctgctccagaactcagagaaaaatatact
gaaaagtgggatctcatcagtgagctgctgaaccagatgagtcagcagaaagttcaaccc
gaccttctgaccttcaacagcgttctgaaagctctgcggcgctgcggctacgtggcaaaa
accaaagctctgcccacgctgagcgagatgaaggccatgggcatctctccgagtttggcc
acctacgaccacatcctggcagcttttttcaaatcagcgtcctctggtacgagcaacatc
gacatcctcctggaagttctgtcggagctggaaggaaggagcttcacctgccaggatcct
gatgatgttctcttcttctccagcgccatgagagtctgtttagacggcaaagatctggag
ctgggatataaggtccagactttggtagaagttggagacaactggaggcttctgggagac
tccttccagcagagtatttactatggccgcttcttccacctgctgtgtatgatggagaac
attgacgtggttttggagtggtaccgaaagatcatcccatcgctgtactaccccaaccct
cagggaatgagggacctgctgcaggcgctggacaccgacagccgcctggacatgctgccg
acgatctggaaagacataaagagtttgggtcacgataacaaatccgagctggtggaggag
ctgctcgccctgatggccagagagaagcacagtccagaggttcaggagtcgtttgctgag
tgtgctctgaatgtcaagagcgtgtgcgatgggaggcccggtacggagtggagcgcctcc
tccctgtcctacatcaccactcttctcctgcgggccaacaaaacccaggaggcctgggag
gtgctgctggtctttaaagccaagaacagaattccttccgaggagttgttgaacagcttc
ctgtcggcctgccacaccaccagagattcccggatcgcagtggagctggtgcagctgtct
tcagccttctgtctgccaatcacatcagcactggcctccagagcgctggcagagttcaac
ctgaccgaggagcagagagccgttctgtctgaactggaggttgcagtggagtcttctgac
tga
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