Oryzias melastigma (Indian medaka): 112153690
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Entry
112153690 CDS
T07439
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04120
Ubiquitin mediated proteolysis
oml04210
Apoptosis
oml04217
Necroptosis
oml04510
Focal adhesion
oml04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112153690
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112153690
04217 Necroptosis
112153690
09144 Cellular community - eukaryotes
04510 Focal adhesion
112153690
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112153690
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112153690
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112153690
03029 Mitochondrial biogenesis [BR:
oml03029
]
112153690
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112153690
Peptidases and inhibitors [BR:
oml01002
]
Peptidase inhibitors
Family I32: IAP family
112153690
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112153690
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112153690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC
zf-C3HC4_3
Prok-RING_4
DUF1731
Motif
Other DBs
NCBI-GeneID:
112153690
NCBI-ProteinID:
XP_024139825
Ensembl:
ENSOMEG00000013584
UniProt:
A0A3B3C514
LinkDB
All DBs
Position
LG10:20849371..20855729
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AA seq
408 aa
AA seq
DB search
MCDLSQDGNWESDSTTDYSQIKNRLKSFCNSSWSQKVSPERLALAGFFFTGDSDRVRCFS
CQETVENWSQEDAPVDRHKEVSPSCMFLRCTHNNSFKSNPHMPLSNGSLNDETAAYMDYQ
LRTKAVVDETPYPRNQNMKSEEARLKTFSSWPSSAPVRPRDLAQAGFFYLGKDDRVQCFC
CGGKLSGWEPGDSPWREHETHYSHCFYVLGHDVGNVPLPEDAGEDEETGSRQRHRKPSSN
MENLEERLATFARVQHPIDHELLAQAGFYSKGEGDKVLCFKCGGGLTDWDSEDDPWEEHA
KYYPGCSFLLSEKGQEFVNKIQLQGPKHTKEDSEHQNGFLEEEKVENPLEELEKLRREKR
CKICLDKSVGIVFIPCGHLASCKECSDKLDQCPICCATIAQKIQTFIA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacctcagccaagatgggaattgggaatcggactccacgactgattactctcag
ataaaaaatcgtttgaaatcattctgcaactccagctggagccagaaggtgtcgccggag
cgactggctttagctgggttcttcttcactggagattctgaccgcgtacgctgcttcagt
tgccaggaaacggtcgaaaactggtcccaggaagatgcaccggtggacagacacaaagag
gtttccccatcatgcatgtttctccgctgcacacacaacaacagttttaaatcaaatccc
cacatgcctctcagcaatgggagccttaacgatgaaaccgcagcatatatggattaccag
ttgagaacaaaagccgtcgttgatgagaccccgtacccaaggaaccagaatatgaagagt
gaagaggcccgccttaaaaccttctcttcgtggccgagttctgctccagtgaggcctcga
gatctggctcaggcaggtttcttctacttaggaaaggatgatagagtgcagtgtttctgc
tgtggaggcaagctgagcgggtgggaacccggggacagcccctggagagaacacgaaaca
cattattcccactgtttctacgtccttggccatgacgtgggaaatgtgccgctgccagag
gatgccggggaggatgaagagactggcagcagacaaaggcatcgcaaaccttcaagtaat
atggaaaatctggaggagcgacttgctacttttgcacgtgtccagcaccctattgaccac
gaactgctcgctcaagccggcttctacagcaaaggagaaggagacaaggtgctctgcttc
aaatgtggtggtggtttgacggattgggactccgaagacgatccttgggaagaacatgcc
aaatattatcccggatgcagctttctgttatcagaaaaaggccaagaatttgttaataaa
attcagctacaaggacctaagcacacaaaagaggattcagagcatcaaaatggattttta
gaggaggagaaagttgagaatccgctggaggagcttgagaagctgcgtcgggagaagcgc
tgtaaaatctgcctggacaagagcgtgggcatcgtcttcatcccatgtggtcatctggcg
agctgcaaggagtgttccgataagctggatcagtgtccgatatgctgtgcaactatagcg
cagaaaatccagaccttcattgcttaa
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