Oryzias melastigma (Indian medaka): 112154157
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Entry
112154157 CDS
T07439
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112154157
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112154157
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
112154157
NCBI-ProteinID:
XP_024140646
Ensembl:
ENSOMEG00000019187
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Position
LG19:complement(8862103..8883163)
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AA seq
1256 aa
AA seq
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MADSGGDGETEMICKSKATKSWIPNIIKKRVCSTFVEDSVSDGKMCQCGKSKKEHPPQAI
GDHFSAAMVNCWDTVRHSSELPTDAFGELQFAGASKRHSYFLRLSWGTNPSTIYNLMTVH
WSLPSPNLVVSVVGGESQKSVKTWVREVIRKGLVKSSQRAGAWIITEGLREGVGKCVGEA
VRDHATAASSGSSNKVVAVGIASWGLVYNKEQLINPEGSYPAKYDIRNSPKDSCCLDNNY
QAFLLVDDGSVDRRGGEISYRAKLEDYISHQPTGIQESGINVPVLCMLISGDPSMLKRVD
LSLKNSMPWLVLAGSGGLADFLSDVVENVSSSPVVQSPVEADGDFSPMVDLKEKVADRVK
KYFPNETETDKVVEQTLSIYQNKDLITVYNGTQEGLNDFDTVLLKALVRASKQRVSVDDS
PYNEELRLAVTWNRVDIARSELFNGDILWKDKDLKDSMTNALINDKPQFVRLFTENGFDI
RSYLTYRKLEKLYQSVPTGTLLYQLLERRLLMRQGITVPVCAPDSEPDSSNHKKESDQSE
PVMKVTLFEVSGVLDMLLDDVCQPFYYDVLDLAHFSSRRRALKQAAKLLVGEREYREKRC
FYPWASLFIWAILQRRNEMATFFWEMAGESVLSALSGCKMLREMSKLETETEGKLSLKEM
AQSFENLAHDIFSSCYRSDENRAFTLLIKKSPVWGGTTCLQMGMGADTRLFFSHDGVQSL
LSQIWWGDMKRNTEVWKLLLTFFCPILCYTNLISFRKQEEQDNKLEDEEGKPNEDHVDSN
YDYGTTVFSYPDMKHIDGDAQAPVSPSTPMIDKDTLFRPPRRPFIVSRWRQFWFAPVTSF
LGNVVMYFLFLVLFAYVLLVDFKPPLLEGPAVSEYVLYFWVFTIVCEEIRETAFLGMMSW
RQRLKSYIQDVWNKIDIAAIILFIVGLICRMYEKSYEFGREVLCVDYMVFTLRLIHIFAI
HKQLGPKIIIVGKMMKDIFFFLFFLGVWLIAYGVANQALIYSYDSNPDRIFRRVFYRPYL
HIFGQIPVEEIDSGKNWDLECTKNRTFIDDGSEPCRAEYSNWVVVVLLVIYLLVTNILLI
NLLIAMFSHTFSEVQANSDIYWKFQRYNLIVTYHFRPSLAPPFIIISHINLFIKRVIRKV
PSIKVRHFVLQLKGKAANKLTTWETIQKEDFLTAKGKTQKHSDSERFRQISAKIDGIQKN
VAETKDLEHRLRSLENDMEYCSKALSWIVETLAQSSTFKHPRPPPSFRDSSSSTSS
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctgggggagacggagaaactgaaatgatctgtaaatctaaagcgactaag
agttggatccccaatatcattaagaaaagagtctgctccacctttgtggaagactctgtg
agtgatggtaaaatgtgtcagtgcgggaaatcaaaaaaagaacatccccctcaggccatc
ggagaccatttcagcgccgccatggtgaactgttgggacactgtccgacactcatcagaa
ttaccaacggatgcctttggagagctgcagtttgcaggagccagcaaaagacatagctat
ttcttgcgtctgtcgtggggcacgaatccgtctaccatctacaacttgatgacggtccac
tggagcctcccgtcacccaaccttgtggtttctgttgtgggcggagagagccagaagtcg
gtgaagacgtgggtgagggaggtcatcaggaaggggctggtcaaatcctcacaaagagca
ggagcgtggataataactgagggtttgcgtgaaggagttgggaagtgtgtgggtgaggcg
gtgagggatcacgctactgctgcgtcttcaggttcttccaacaaggtggtggcggttggc
attgcatcatggggcttagtctacaacaaagagcagctcatcaacccagagggaagttat
ccagccaagtatgatatcaggaactctccgaaagactcctgctgcctggacaacaactac
caggcctttctgctggtggatgatgggagtgttgaccgccgaggaggagaaataagctat
agagccaaactggaggactacatttcccatcagcccactggaattcaggaaagtggcatc
aatgttcctgttctttgcatgctgatatcaggagatccaagtatgctaaagagagtggat
ctctcgctgaagaactccatgccctggctggtgctggctggttctggaggcctggcagat
ttcctcagcgatgtggtggagaatgtgtcctcatccccggtggtccagtctccagtcgag
gctgacggagacttcagccccatggtggacctgaaggagaaggtggcagatcgggttaag
aagtacttcccaaatgagactgagacggacaaagtcgtggagcagactctgagcatctac
cagaacaaagacctgatcacggtttataacggaacacaggaggggctgaatgactttgac
acagtgctgctcaaagcgttggtgagagcgagtaagcagcgtgtgtcggttgatgacagt
ccctacaacgaggagctcaggttggcggtcacatggaacagagtcgacattgctaggagt
gaacttttcaatggagacatcctctggaaagataaagacttgaaagactccatgacgaac
gccctgatcaacgataagcctcagtttgttcggctttttaccgaaaacggcttcgacatc
cggagttacttgacttacagaaagctggagaagctgtatcagtctgtgcccactggaacg
ctcttataccagctactggagcgccgcctactgatgcgccaaggaattacagtccctgtg
tgtgctccggacagcgagccggattcatcaaaccataaaaaagagtctgatcagagcgag
ccagtgatgaaagtgactctttttgaggtgtctggtgttctggatatgcttcttgatgat
gtctgccagccgttctactatgacgttttggatttggcgcatttctcgtccagaagaaga
gctctcaagcaagctgccaagcttctagtcggggagagggagtacagggagaagcgctgc
ttctacccctgggcttcactcttcatctgggcgatcctccagaggcggaatgagatggcc
actttcttctgggagatggcgggcgagtcggtgctgagcgctctcagtggttgtaaaatg
ttgagagagatgtccaagctggagacggagactgaaggcaagctgtccctgaaagagatg
gctcagagctttgagaatctggcacacgacatcttcagctcttgctatcgcagtgatgag
aatcgcgccttcaccctcctgattaagaagtctcctgtttggggcggcaccacctgttta
cagatgggcatgggcgctgacaccagacttttcttcagccatgatggcgtgcagtctctc
ctgtcccagatctggtggggggacatgaaacggaacacagaggtgtggaagctgctgctg
actttcttctgtcccatcctctgctacaccaacctcatttcctttagaaagcaagaggaa
caagataacaagctagaagacgaagaagggaagcccaacgaggaccacgtggatagcaac
tatgactatggaaccactgtgttctcctaccctgacatgaaacacattgacggtgacgct
caggctccagtctctccttcaacacccatgattgacaaagacacacttttccgaccgccg
cggcgtcccttcatcgtgtcacgctggcgtcagttctggttcgcacctgtcacctcattt
ttgggcaacgtggtgatgtacttcctcttcctggtgctcttcgcctacgtgctgctggtg
gattttaagccgccgcttcttgagggtccggcggtctcggagtatgtgttgtacttctgg
gtgttcaccatcgtgtgtgaggagattagggagacagcctttttggggatgatgtcttgg
cgccaaaggctgaagagctacattcaggacgtgtggaataaaatcgacatcgccgccata
atcctgttcatcgttggactgatctgcaggatgtatgaaaagtcgtacgagtttggcaga
gaagtcctgtgtgtggattacatggtcttcactcttcgcctcattcacatcttcgccatt
cataaacaactgggaccaaaaatcatcatcgttgggaagatgatgaaggacatcttcttc
ttccttttcttcctgggggtgtggcttattgcatatggagtagccaatcaggctttgatt
tattcctacgactccaatcctgatcggatctttcgcagagttttctacagaccgtacttg
cacatatttggacaaattccagtggaggagattgattctggaaaaaattgggatttggaa
tgtaccaagaacaggacatttattgacgatggttcggagccgtgcagagctgagtacagc
aactgggtggttgtggtcctgctggtcatttatctgctagtgaccaacatcctgctcata
aacctgcttatcgccatgtttagccacaccttctctgaagtgcaggcaaacagcgatatc
tactggaagtttcagcgctacaacctgatcgtcacttaccattttcggccaagtttggct
ccgcccttcatcatcatttctcacatcaacctctttattaagagggttattcgcaaagtg
ccatctatcaaagttcgccactttgtattgcagctgaaaggcaaagcagcaaacaagcta
acaacatgggaaaccattcagaaagaggacttcctgacagctaagggcaagacccagaaa
cacagcgattcagagagattcaggcagatctctgccaaaattgatgggattcagaaaaat
gtggctgaaaccaaagaccttgaacacagactgagatctctggagaatgacatggaatat
tgctcaaaggctctcagctggattgtggaaactttagcacagagcagcactttcaaacat
ccacgaccgccaccttcttttagagattctagctcctcaacatccagctga
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