Oryzias melastigma (Indian medaka): 112154421
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Entry
112154421 CDS
T07439
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112154421 (lgi1b)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
112154421
NCBI-ProteinID:
XP_024141093
Ensembl:
ENSOMEG00000023336
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All DBs
Position
LG19:7134128..7150946
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AA seq
550 aa
AA seq
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MFLCASLRASGWRGWRLLLLLCVAAASLVLIDGRRVKQPRCPAGCTCTKDNALCEDVRSV
PHAFPSDVLSLSFVKSGFSEITGGSFVHTPHLQLLLFTANTFDIIDEDAFAGLHHLEYLF
IENNRIASISPNAFRGLKALIHLSLAYNNLDTLPRDVFKGMDALSKVDLRGNNLICDCKL
KWLVEWMHQTNATLDQIHCSGPPIHQGRKINDLLPHSFDCITTEFASYQPLKFESISVEA
FTFDNEQYVVFAQPFAGTCSFLEWDHVEMTFRTYDTIESTSTVVCKPMVIDHHLFVIVAQ
LFGGSHIYKRDTSANKFIKIQDIDILKIRKPNDIETFVINGESFFVIADSSKAGSTTVYK
WNGNGFYTHQSLHPWYRDTDVEYLEISNKPHLILSSSSQRPVVYQWNRSQKKFDRRTDIP
DMEDVFSVKHFWVKGDLFICLTRFIGDSRVMRWDGAMFREVQTFPSRGSMVFQPVSVSNW
QYAILGSDYSLTQVYQWDTKRGQFIPSQELNIQAPRSFSVVSVDNRVFLLASSFKGKSQI
FEHHEIDLSD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtgcgcaagtttgcgcgcgtcgggatggagaggctggaggctgctgctgctg
ctgtgcgtcgccgctgccagtttggtgctgattgatggacggagggtgaagcagcccaga
tgccccgctggatgtacgtgcaccaaggataatgccctgtgcgaggatgtccgctccgtg
ccgcacgcgttcccctccgacgtgctgtctctgtcttttgtcaagtcaggattcagtgaa
atcaccgggggcagctttgtgcacactccccacctgcaactcctattattcacagcaaac
acgtttgatataattgacgaggatgcgtttgctggtttacatcacctcgaatacctattc
atcgaaaacaacagaattgcatcaatatctccaaatgccttccggggcctgaaggctttg
atccacctgagtctggcctacaacaacctggacacgctgcccagagatgttttcaagggc
atggatgctttgagcaaagtagatctgcgaggcaataatctgatttgtgactgcaagctg
aagtggttggtggagtggatgcatcaaaccaacgccaccctggaccagattcactgcagc
ggcccccccattcaccaagggaggaagatcaacgacctgctgccgcactcttttgactgc
atcacaacagagtttgcttcctatcagccgctgaagtttgagtcgatttccgtggaggcg
ttcacctttgacaatgagcagtacgtcgtgtttgctcaacctttcgctgggacctgcagc
ttcctggaatgggatcacgttgagatgaccttcagaacttatgacaccatcgaaagtacc
tccactgtcgtctgcaagcccatggtgattgaccatcacctctttgtcattgtggctcag
ctgttcgggggctctcatatttacaagcgcgacacctctgctaacaagttcatcaagatc
caggacatcgacattctcaagattcgcaagcccaatgacattgagacattcgtgataaat
ggggagtcgttcttcgtcatcgctgacagctctaaggctggctccacaactgtgtacaaa
tggaatgggaatggcttctacacccatcagtcgctccacccctggtacagggacacagac
gtagaatatttggagatctcaaacaagccccacctgattttgtccagcagctcccagaga
cctgtggtgtaccagtggaacaggagccagaaaaagtttgacagaaggaccgacatacca
gatatggaagacgtcttctctgtcaaacatttttgggtgaaaggtgatctgttcatatgc
ctgacaagattcatcggggactccagggtgatgcgctgggacggtgccatgttcagagag
gttcaaacatttccctcccgtggctctatggtcttccagcccgtctccgtcagcaactgg
cagtatgccatcctgggaagcgattattcactgacgcaggtctaccaatgggacactaag
aggggccagttcattccatcccaggagctgaatatccaggctccccgatcattttctgtg
gtttcagttgacaacagagttttcctgcttgcatccagcttcaaggggaaaagtcagata
tttgagcaccatgagattgacctgagtgattga
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