Oryzias melastigma (Indian medaka): 112154473
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Entry
112154473 CDS
T07439
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X2
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04140
Autophagy - animal
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112154473 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112154473 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154473 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112154473 (plekhm1)
Membrane trafficking [BR:
oml04131
]
SNARE
SNARE associated proteins
Others
112154473 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
112154473 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
112154473
NCBI-ProteinID:
XP_024141207
Ensembl:
ENSOMEG00000005265
UniProt:
A0A3B3BGJ3
LinkDB
All DBs
Position
LG19:16365672..16378187
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AA seq
1063 aa
AA seq
DB search
MLATQMPDSPPEVEDVKQIKEKLAQSLKALQKKYVTSDEVVTSEDGDANLLCCALEAIFI
HGIKSKFIRSEAGTWGRKGDRGPLPQPFFWSLLKSVTHSDVITELEKINFVSTDVGRCRA
WLRLALNHGLVECYLASLFREDSMLRAYYQPSAFLLNSEEREVLLSYLQGLASLTFNLSY
KSAVLNEWTTTPLALAGLCPMSKLDTFGLLLNGDYQTKSVRKESWDTVSQSSGSSDCQAL
PAKGSGVLPALNSSNLSLDTTGSSQLSSSLSSDSLLQGQVSRSLTAEQWSSGDLDPPIHV
STKKSSKDFPSGNRESRNCSQDSMREDSFVSSAGVDPFSENATFSGSDSEIQGPAESDHH
PTDQPPSYTSEPEPASLDLPSCEEQPDEHQICNGADSVAHLCPPVVSTLHEPELFEKDVK
SEGENSEPVQDVTQSNISEESSTKTEEHQSSLRSSSITSRKLSSESLPHSDSWISADDIF
KPHLEKIVDDDEAPPAAELKTSQSPPSVVHRRQIGLSNPFRGLLKLGHLDRKGAMGMWRD
YYCELSPFEFRLYVNAEERTCCENCSLLRCEDARITSSEGRFELAFPGKRLYLRAANHDE
AEDWVDRIVEAVNKCRPAAPVDEQWEVLRPISENGLDECSVMSPSSAPGSPERLSAFDRN
GLKAGVSPQEFNWTQTVELELDALKEAVLYFSTEAEPRVWTPMVFSLSLEALKGFLVHEG
KKSPRLSYPIEEIRDVVPDVSLGGPAFFKLLTVKHTIKFRAENPNEARSWRVLIRGALDA
YLESGEDGPSEDSSSPWNSGSAGNLHRLIQHQLKEDGALLTHLYTVQSEKGLDSQSFKCA
DCSQQIGPSLGRARLCEFSGQYYCDSCHIRDTSIIPSRMLHNWDLIPREVSKRAVRVLAH
IQQEPLLNLELLNPELVKHSESMAQVHSLRNRLRLLGDYLLTCRSGAYKHLQKKMEKRTY
LLESSHLYSIMDLQQIAEGQYSNFLITLVQHACKHVLNCDLCSQRGFICQICHSDDILFP
FQFESTVRCKDCKAVFHAACKSASRSCPRCQRMKKYLERDLED
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccacacagatgccagactcaccaccagaggttgaggatgtcaaacagattaag
gagaagttggctcagtcactcaaggccctgcagaaaaaatatgtgacatcagatgaagtg
gtcaccagcgaagatggagacgccaacctcctctgctgtgccttggaggccattttcatc
catgggatcaagagcaagttcatccgctccgaggctgggacctggggtagaaagggggac
cgaggacccctccctcagccttttttttggagcctccttaaatcagtcacccacagtgat
gtgatcacagagctggagaagatcaactttgtgagcacggatgtgggtcgctgtcgagcg
tggctgcgtctggctctaaaccacggcctggtggagtgctacctcgcatccctgttccga
gaggactccatgctgcgggcttactatcagcccagtgcctttctcctgaactcagaagaa
cgagaagtcctcctcagctacctccagggtctggcctcgctcacgttcaacctgtcgtac
aaatcggcagtcctcaacgagtggaccaccactcctctagctcttgctgggctttgcccc
atgtccaagctggacacttttggcctgcttctcaacggcgactaccagactaagtccgtg
cgtaaagagtcttgggatacagtgtctcagtcttctggttcttcggattgtcaagcactg
ccggcgaaagggtcgggcgtgttaccagcgcttaactcgtcaaatttaagcctcgacacc
actggatcctcacagctctcctccagcctgagctctgacagcctcctgcagggacaggtc
tcccgcagcctaacagcagaacagtggtcttcaggggacctggatccacctattcacgtc
agcacaaagaagtcaagcaaagattttccgtctggaaacagggagagccgcaactgcagt
caggactccatgcgcgaggactcgtttgtctccagcgcaggagtcgatcccttctcagaa
aacgccacctttagtggctccgatagcgagatccaaggccctgctgagtcagaccatcat
cctacagatcaacccccaagttatacctcagagccagaaccagcatccttggatttgccc
tcctgtgaagagcaaccggacgagcaccagatttgcaacggtgctgattctgtagcacac
ttatgtccacctgtggtttccacactccatgagcctgagctgtttgaaaaggatgtgaaa
agtgaaggagagaacagcgagccagtccaggacgtgacgcagagcaatatctcagaggag
agcagcaccaaaactgaagagcatcaaagttctctgcgctccagtagcatcaccagcagg
aaactctcctcagagtcgcttccacattcagattcttggatttctgcagatgacatcttt
aagcctcatttagaaaagatagtggacgatgacgaggcgccccctgcagcggagctcaag
acgtctcagtctcctcccagtgttgtgcaccggagacagataggactatcgaaccctttc
cgtggcttgctgaaactcggccacctggatcgcaaaggcgcgatgggaatgtggcgcgac
tactactgcgagctgtcgcccttcgagttccgtctgtacgtcaatgcggaggagcgcacg
tgctgcgagaactgctccctcctgcggtgcgaagacgctcgcatcacctcctcggagggc
cgcttcgagctagcttttcccgggaaaagactttacctccgagccgcgaaccacgacgaa
gccgaggactgggtggaccggatagtggaagcagtcaacaaatgtcgccccgcagcgcct
gttgatgagcagtgggaggtgctgcgccccatcagtgagaacggcttggatgaatgcagc
gtcatgtctccgtcttctgcccccggcagccccgagagactgtctgcctttgacagaaac
ggactgaaggccggcgtttctccacaggaattcaactggacgcagacggttgaattggag
ttagacgccctaaaagaagccgtcttgtacttctccacagaagcagagccccgcgtgtgg
acacccatggtcttctccctctctttggaagccctgaaaggcttcttagtgcacgaggga
aagaagtcaccccgcctgtcctaccccatcgaagaaatcagggacgttgttcctgacgtc
tctctgggcggaccagcctttttcaaactcttaaccgtcaagcacacgatcaaatttaga
gcagagaacccaaacgaggctcgcagttggcgggttttgatccgtggagctctggacgcg
tacctggagagcggcgaggatggaccgtcagaggattcttcctcaccatggaactctgga
agtgctggcaacctgcatagactgattcagcaccagctgaaagaagacggcgccttactg
actcacctgtacacggttcagtcagagaaggggctggacagtcaaagcttcaagtgtgca
gactgctctcagcagatcggaccgtcgctgggcagagccagactctgtgagttctctggt
cagtactactgcgactcctgccacatcagggacaccagcatcatcccatcgcgaatgttg
cacaactgggatctcattccacgagaggtgtcaaagagagccgtgcgtgtcctggcccac
atacaacaggagcctctgctgaacctggagctgctaaacccagagctggtgaagcattca
gagtccatggctcaggtccacagtctgcgcaaccggctgcgtctgctgggtgactacctg
ctcacctgccgcagtggagcatacaagcacctccaaaaaaaaatggagaagcgcacatac
ctgttggagtcaagtcacctgtacagcatcatggatctacagcagattgcagaaggccaa
tattccaacttcctgatcactctggtgcagcacgcctgtaagcatgtgctgaactgtgac
ctgtgctctcagcggggcttcatttgtcagatttgtcactcagatgacatcctcttcccc
ttccagtttgagagcaccgtgaggtgtaaagattgtaaagccgtattccacgccgcctgc
aaatctgcgagtcgctcctgtcctcgctgtcagcgaatgaagaaatacctggagagggac
ctggaagattga
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