Oryzias melastigma (Indian medaka): 112154545
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Entry
112154545 CDS
T07439
Symbol
snu13b
Name
(RefSeq) SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5)
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112154545 (snu13b)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112154545 (snu13b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112154545 (snu13b)
03009 Ribosome biogenesis [BR:
oml03009
]
112154545 (snu13b)
Spliceosome [BR:
oml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112154545 (snu13b)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
112154545 (snu13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
112154545
NCBI-ProteinID:
XP_024141334
Ensembl:
ENSOMEG00000006161
LinkDB
All DBs
Position
LG19:complement(2609649..2612549)
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AA seq
128 aa
AA seq
DB search
MTEADVNPKAYPLADATLTKTILDLVQQASNYKQLRKGANEATKTLNRGIAEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSVQ
MAIERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagctgatgttaacccaaaggcttacccgctggctgacgccactttaaccaaa
actattttggatttggtgcagcaagcctccaactacaagcagctgaggaagggggccaac
gaagcgactaaaaccctgaacagaggaatcgccgagttcatcgtgatggcggcggacgcc
gagccgctggagatcatcctccacctgccgctcctctgcgaggacaagaacgtgccgtac
gtgttcgtgcgctccaagcaggcgctgggccgcgcctgcggcgtgtcgcggcccgtcatc
gccacctccgtcaccataaaggagggctcccagctcaagccgcagatccagtcggtccaa
atggcgatcgagagactcctggtgtga
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