Oryzias melastigma (Indian medaka): 112154876
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Entry
112154876 CDS
T07439
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112154876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112154876
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112154876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf_C2H2-Disco
zf_C2H2_ZNF292
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112154876
NCBI-ProteinID:
XP_024141872
Ensembl:
ENSOMEG00000018141
LinkDB
All DBs
Position
LG21:28749894..28770002
Genome browser
AA seq
1284 aa
AA seq
DB search
MEHYLRSVHGSPTLSMISAARGLSPADVTQEHLKDRALFSLPPLPLGVIPADYHQLMASS
QRSPCGDLLMQNGAAAHLPEYISPLDASRFSSPRLTPRLNRKRVLSISPLSDGSIDLQTM
IRTSPSSLVAYINNSRSSSAASSSYGHLSVGGISPTFSIPHPINPMPYQHLLSHQRGLNA
FGHAMPLIQTSSYPPRHHPHAASSMSCSNLNSEADQNSSGDSSVSSTNNPQSTKRSKVKT
EAISPSVQECRCSVLDVSEDLDKDDCKQELDAIYETHCHWEGCSKEHDSQDQLVHHINNY
HIHGEKKEFVCRWEDCSRDQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLK
THLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNQPGLPGAGSTWSEVYLEPVLP
GAGFTWNEVYLERGLPGAGSTWSRVYLEPVLPKKPYVCKVPGCTKCYTDPSSLRKHVKTV
HGPEAHVTKKQRSDAPPRGNGGAELHSRNGPRGSDGQTDTRNTSGLEECLRAGSIKAEDS
VMSQPGSGGLSSCSSEPSPLRRTNNNTSGVEIAIHSGGSFGDPSSQEGVPLVDSTVPSRA
QQVGGGDLSRAVSIKLENIKKERLQTVSEVCVRVPGAQGPPQSQCSSTRLPPIPAAGSLL
DASTMLSSLDSGRPVVDLAPREVPLLNQLIERRSSTTSTISSSYTMSRCSSDSSRRCSHQ
STISPAESYDPISTDLSRRSSEASHSGGVGLPGLLSLTPAQHYQLKAKYAAATGGAPPTP
LPNVDQMRLRTWRKVYRDPPEVFALSRNVPRRRSDTGYGTETMMPHEVPNHFPRRASDPE
NRPNLEHLSWRRIQHYNSLNPIICLSVSERHHMLGCTHSDGSLQYYPLDPQPPSISEHVD
NMAAGDGASGGDDLVLPDDMVQYLQSQNSKIDCDPCSQTQGDRACSVPSFNAQRRTATLG
SGISQSNQDLQMEIKSSQQPFSASSSITNKNMPVQWHEVSSGTMDTPTRLSRQHHLCRGN
LAVAKQRHNFEVLQGQHLDQDSNQRLMRVFSKHHQQPRQCNLRNVRGQEPKSVSGSTNMQ
PFQPNLSLQKNSRGMLQPEPPSEPKPATRQRCCFSSTQPRRISRSSETTLGQNVDSSEAT
PKRPNKSTSHNSQSENLIRAVFCTGQTPSVGLKASLSTGGPDNHITASPGVNQVSSSTAG
SSTCEGWESEHAMLDYGDHSSIMSGSLSPRLLQSLSQTSSRLTTPRNSVSLASVPAGISN
MAIGDMNSMLTALAEESKLFNMTS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagcattatctgcgctcggttcatggcagccccacgctctccatgatctcagctgct
cgaggactcagtccagcggacgtgacccaagaacacctgaaggaccgggctctgttcagt
ttacctccgttacccctgggagtaatccctgcagactaccaccagctgatggccagcagc
cagaggagcccatgtggcgacctgctgatgcagaacggtgcagcggcccatctcccagaa
tacatcagccctctggatgcttcccgtttttccagccccaggctgacacctcgactgaat
cggaagagagttctgtccatctcgccgctgtccgacggcagcatcgacctgcagaccatg
atccgaacctctcccagctctctggtggcttacatcaacaactcccggtccagttcagct
gccagcagctcttacggacacctgtctgtgggcgggatcagtcccaccttcagcatcccc
catcccatcaaccccatgccgtatcagcatctcttgtcccaccaaagaggtctgaacgcc
tttggacacgcgatgcccctgatccaaacatcgtcctatcctccacgccaccaccctcat
gcggcctccagcatgtcctgcagtaacctgaactcagaggctgaccagaactccagtgga
gattcttccgtcagcagcaccaataaccctcagagtaccaagaggtcaaaggttaagact
gaagccatctcaccctccgtccaggagtgcaggtgcagcgtcttggatgtgagcgaggat
ctagacaaagatgactgcaagcaggagctagacgccatttatgagacgcactgtcactgg
gagggctgttccaaggagcatgacagccaggaccagctggttcatcacatcaacaattac
cacatccacggggagaagaaggagtttgtgtgtcgctgggaggactgctcccgggaccag
aagcccttcaaagcccagtacatgctggtggtccacatgaggaggcacacgggggagaag
ccgcacaaatgcacatttgaaggatgctccaaagcgtactcgcggctggagaacctgaag
actcacctgaggtctcacacaggagagaagccttatgtgtgtgagcatgaaggctgcaac
aaggccttctccaacgcctcagacagagccaagcaccagaaccggacccactccaaccag
ccaggcttacctggagcggggtctacctggagcgaggtctacctggagccggttctacct
ggagcggggtttacgtggaatgaggtctacctggagcgaggtctacctggagcggggtct
acctggagcagggtttacctggagccggttctacctaaaaaaccgtacgtctgtaaagtc
ccaggctgcacgaagtgctacactgaccccagttctctaaggaaacacgtgaaaacggtt
cacggacccgaagcccacgttaccaagaagcagcgcagcgatgcccctcccagagggaac
gggggggctgagctgcactccaggaatggacctcgaggctcggatggccagacagacacc
aggaacacatccggactggaggagtgtctccgggccggaagcatcaaggcagaggactcg
gtgatgtctcagcctggttctggtggactctcctcctgcagcagtgagccctcccctctc
aggagaaccaacaacaacactagtggggtagagatcgccatccacagtgggggcagcttt
ggggaccccagcagccaggagggggtccctttggttgactccactgttccttcaagagcc
cagcaggttggggggggagatctgagccgagctgtctccatcaagctggagaatatcaag
aaagaaagactccagacagtgagtgaggtgtgtgttcgtgttcctggagcccagggcccc
ccccagagccaatgcagcagcacaaggctgccccccatccctgcagcaggctccctgctg
gacgcttccaccatgctgagcagtttggactcggggcggccggtggttgacctggcgcca
cgtgaagtcccgcttcttaaccagctgattgagcggcgcagcagcaccaccagcaccatc
agttcctcttacaccatgagccggtgctcctctgactccagccgccgctgcagccatcag
tccaccatcagtccagcagaatcctacgacccaatctccacagatctgtctcgccgttcc
agtgaggccagccattccgggggggtgggcctcccaggacttctgagtctgaccccggct
cagcattatcaactcaaggcaaagtatgcagctgccactggtggagctccgcccacccct
cttcccaacgtggatcaaatgaggctgagaacgtggaggaaggtctacagggaccctccg
gaagtctttgctctctccagaaacgtgccgaggcgccgcagtgataccggctatggcact
gagaccatgatgccccatgaggtgcccaaccatttccctcgccgtgctagtgacccggag
aatcgccccaacctggaacatttgtcatggagaagaattcaacactacaacagcttgaac
cccattatttgtctatcagtgtctgagcgtcatcacatgcttggatgcactcactctgat
ggaagccttcaatactacccgcttgaccctcaaccccccagcatttctgagcatgtggac
aacatggcagctggggatggagctagtggaggtgatgacttggtgcttcctgatgacatg
gttcagtatcttcaatctcagaattctaagattgactgtgacccctgcagccaaactcag
ggtgaccgggcatgttcggtcccatccttcaatgcacagaggagaacggccacgctgggt
tctgggataagtcagtctaatcaggacttgcagatggaaattaagtcctcacagcagccg
ttctcagcctcatccagcatcacaaacaagaacatgccggttcagtggcatgaggtcagc
tcagggacaatggacaccccaacaaggctatccaggcagcatcatctttgcagggggaac
ctggctgttgctaaacaaagacacaacttcgaggtccttcagggtcaacatttggaccag
gacagcaaccaaaggctgatgagagtcttctctaaacaccatcagcagcccagacaatgc
aacctgagaaatgttagaggccaggaacccaagtcagtatctggaagtaccaacatgcaa
cctttccaacccaacctctccctgcagaagaacagtagaggaatgcttcaaccagaaccg
ccctcagaacccaagcctgccaccagacaaagatgctgcttcagctcgacacaaccgaga
cggatttccagatcatctgaaacaaccttgggtcaaaacgtggacagctctgaggccacc
ccaaagagacccaacaagtccacaagtcacaacagccaatcagaaaacctgatccgagcc
gtcttctgcacaggtcagactccctctgtcggcctcaaggcctctctgtctactgggggg
ccggacaaccacatcacagcctcaccaggagtcaaccaggtctccagcagcacggcaggc
tcctccacatgtgaaggatgggagtcagagcatgccatgctggactatggggaccactcc
agcattatgtccggtagtttaagtcctagacttttacagagcctctcccagacttcctca
cgcctcaccacacctcgcaactctgtgagtctggcatcagtgccggcagggatcagcaac
atggccatcggggacatgaactccatgctcacagccttggcagaagaaagcaagctcttc
aacatgaccagctga
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