KEGG   Oryzias melastigma (Indian medaka): 112154991
Entry
112154991         CDS       T07439                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X3
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112154991 (kdm6a)
Enzymes [BR:oml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     112154991 (kdm6a)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     112154991 (kdm6a)
   Histone demethylases
    112154991 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_17 TPR_2 TPR_8 TPR_11 TPR_12 TPR_16 TPR_19 TPR_9 TPR_7 TPR_CcmH_CycH RPN7 ANAPC8 ANAPC3
Other DBs
NCBI-GeneID: 112154991
NCBI-ProteinID: XP_024142084
LinkDB
Position
LG21:1413273..1444263
AA seq 1265 aa
MVYFHYNAFQWAIKAFQEVLYIDPSFSRAKEIHLRLGLMFKVNTDYESSLKHFQLALIDS
NLCTLSKAEIQFHIAHLYEIQKKYRAAKEAYESLLQTENLPAQVKATTLQQLGWMHHTVE
QLGDKGTKDSYAIQCLQKSLEADPNSGQSWYLLGRCYSSIGKVQDAFISYRQSIDKSEAS
ADTWCSIGVLYQQQNQPMDALQAYICAVQLDHNHSAAWMDLGTLYESCGQLHDAMKCYIN
ATRSKTCLNTAALTQRIKLLQAQLCNLHPGSLQNKSKMLPSIEEAWSLPIPAELTSRQGA
LNATQAQQACKGGEAPSASNHSDPQASPAKKKRTASPVKSAADSISSNQPQMSSCYLTPQ
KLKHLDHLRAHRASLKPPELQMLQLLEKQFSAAQQQQQQQQQQQQQMRQLAADGGQPRPG
LSNGPSGDSSPPVRPPSANGACSMSPAAGLQGHPDKSPSLWLGGGSTVNGNVPYSQKTSL
PHTCAAASSTSSTSSPIHADDTWKSQQRNTTTQELQKDPGSHSAGPNGEPPSSSSSSPLQ
NPLSSSSSTGILNQVGHGSGPCTASSSASSLSPTSPQTTPNHLSSPPHFATTSGVHTKDN
APSGGSRGGASTLGSIRPSGEAPHSPSTTPMEGLANHIQPGGTDGSSAPSMLSSDNPQLS
ALLKGKANATSADHADCSTHGGSEKTNNIRPGLHAATEHAGASSSLCAATTASPRTPDGP
NCSSSIHGQGPALNGNRSPLKAEPAWGAHRLSSGPSPWSSVSIYPSSSEVLKACRNLGKN
GLSTSSILLDRCPPPRPPAPPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPANP
VTVIRGLAGALKLDLGLFSTKTLVEANPEHLVEVRTQLAQPADENWDPSGSKKMWRCESS
RSHTTILKYAQYQASSFQESLREENEKKKEVEAEAGSPESLMRRRKAPFKHIKFGTNIDL
SDEKKWKLQLQELTKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGCRTPGHQENN
NFCSVNINIGPGDCEWFAVPEAYWGVINSFCEKNNINFLMGSWWPNLEDLYETDVPVYRF
IQRPGDLVWLNTGAIHWVQAIGWCNNIAWNVGPLTAYQYKLAVERYEWNKLQSVKSIVPM
IHLSWNMARNIKVSDHKLFEMIKYCLLRTLKQCQVQRDMLQAAGKELVWHCRTQSEPAHY
CSVCEVEVFDLLFVTSESNSRKTYIVHCQDCARRASANLDNFVVLEQYKISDLMQVYDQF
TLVSV
NT seq 3798 nt   +upstreamnt  +downstreamnt
atggtttatttccattacaacgcatttcagtgggccatcaaagccttccaggaggtgctg
tacatcgaccccagtttctccagagctaaagagattcacctgagactgggactgatgttt
aaagtcaacacggactacgagtcaagcttgaagcattttcagctggctttgattgactcc
aatctctgcacgctgtccaaagctgaaattcagttccatatcgctcatttgtatgaaatt
cagaagaagtacagagcagccaaagaggcttacgagagtctgctgcagacggagaatctt
cctgctcaggtgaaggcaaccacactacaacaactaggctggatgcatcacaccgtggaa
cagctcggagacaaaggcaccaaggacagctacgccatccagtgtctgcagaagtctctg
gaagcagaccccaactctggccagtcctggtacctactcggcaggtgctactccagtatt
gggaaggtgcaggatgccttcatctcataccgtcagtccatcgacaagtcagaagccagt
gccgatacctggtgctccataggcgtgctgtaccagcagcagaaccagcctatggacgcg
cttcaggcctacatctgcgccgttcaactggatcataaccactctgccgcctggatggac
ctgggcaccctttacgagtcctgcggccagctgcacgacgccatgaagtgttacatcaat
gccactcgcagcaagacctgtctgaacaccgcagccctcacgcagcgcatcaaactcctg
caggctcagttgtgtaacctgcatccaggtagtctgcagaacaagagcaaaatgcttcct
agtatagaggaggcgtggagccttcccatccccgctgagctcacgtccaggcagggggcc
ctgaacgccacacaggcacagcaggcctgtaaaggtggtgaagccccgtctgccagcaat
cactcagacccacaagctagtccggccaagaagaaacgaactgccagcccggtgaagagt
gctgcagactccatcagctccaaccaaccgcagatgtccagctgctatttaacccctcag
aaactcaagcacctggatcacttgcgggcccaccgagcgagcctgaagcccccggagctg
cagatgcttcagctcctggagaagcagttctctgccgcgcagcagcagcagcagcagcag
cagcagcagcagcagcagatgaggcagctggcggcagacggaggccagccacggcccggc
ctctccaacggcccgtcgggtgactcctcccccccggtccgccccccttctgccaacggg
gcgtgttcgatgagtcctgcggcgggactgcaggggcacccggacaaaagccccagcttg
tggttgggaggtggcagcacggtcaatggaaatgtgccttactctcagaaaacctctcta
cctcacacctgtgcagccgccagcagcaccagcagcaccagcagccccatccatgcagac
gacacctggaagagccagcagcgcaacactaccactcaggagcttcagaaagatccaggt
tcacattcggcaggtcctaatggagaacccccctcctcctcttcctcctcccccctccag
aaccccctctcctcctcctcctccaccggcatcctgaatcaggttggacatggttctggg
ccctgcactgcctcctcctcggcctcctctttgtcccccacctccccccaaacaactccc
aaccacctgtcctcgcctccccactttgctactacctcaggggtccacaccaaagacaac
gcaccttcaggtggcagcaggggcggagcttcaacgttgggcagcatcaggccttctgga
gaagctccacacagtccgagcaccacccccatggagggattagctaatcacatccagccg
ggggggacggacggctcctctgcccccagtatgctaagttcagacaatcctcaactctca
gccttgctaaagggaaaagccaatgcaaccagtgcagaccatgctgactgcagcacccac
ggagggtcagagaaaaccaacaacatccgcccgggtctccatgctgccacggagcacgcc
ggtgcctcttcctctctgtgtgccgccacaaccgcctcccctcgcacccccgacggcccg
aactgctcgtccagcatccacggtcaggggcctgctctcaacgggaacaggagtccgctg
aaggcagagccggcgtggggggctcacagactgtcttctggtccgagtccctggtcctca
gtttccatttatcccagctccagtgaagtgctcaaagcgtgcaggaatctggggaagaac
ggcttgtccaccagcagcatcctcctggaccggtgtccccctccgcggcctcccgctccc
ccctctcctccgctcccaaaagacaagctcaacccccccacgcccagtatctatctggag
aacaagagggatgccttcttcccccccctccaccagttctgcaccaacccggccaacccg
gtcacggtcatcagggggctggctggagcgctcaagctggatttagggctgttctccaca
aagactttggtcgaggccaaccccgaacacctggtggaggtgcggacccagctcgcccag
cccgccgatgagaactgggaccccagcggcagcaagaagatgtggcgctgcgagagcagc
cgctcccacaccaccatcctcaaatacgcccagtaccaggcctcgtccttccaggagtct
ctgcgggaggagaatgagaaaaagaaagaggtggaggcagaagcaggttccccagagagt
ttgatgcgcagaagaaaagctccattcaagcacatcaagtttggaaccaacatcgacctt
tcagacgagaagaagtggaagctgcagctgcaggagctgaccaagctgccggcctttgcc
cgggtggtgtctgccggtaacctgctcagtcacgtgggacacaccatcctgggcatgaac
accgtccagctgtacatgaaggtgccgggctgcaggacgccaggccaccaggagaacaac
aacttctgctccgtcaacatcaacatcggtcccggcgactgcgaatggttcgccgtccct
gaggcgtactggggcgtcatcaacagcttctgtgaaaagaacaacatcaattttctgatg
ggctcctggtggcccaacctggaggacctgtacgagaccgacgtgcccgtttaccgcttc
atccagcggcctggagacttggtgtggctcaacaccggcgccatccactgggttcaggcc
atcggctggtgcaacaatattgcgtggaacgtgggacccctcacagcatatcagtacaag
ctggcagtggagcgctacgagtggaacaagctgcagagcgtcaaatccatcgtccccatg
atccatctctcctggaacatggcgaggaacatcaaagtctcggaccataagctttttgag
atgatcaagtactgcttgttgcggacgctgaagcagtgtcaggtgcagagggacatgctg
caggctgccgggaaggagctggtgtggcactgcaggacgcagagcgagccggcgcattac
tgcagcgtttgtgaagtggaggtgttcgacctgctttttgtgaccagtgagagcaacagc
aggaagacgtacatcgttcactgccaggactgcgcgcgcagggccagcgccaacctggac
aactttgtggtgctggagcagtacaagatcagcgacctcatgcaggtttatgaccagttc
acactagtaagtgtctga

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