Oryzias melastigma (Indian medaka): 112155522
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Entry
112155522 CDS
T07439
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04081
Hormone signaling
oml04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112155522 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112155522 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155522 (rapgef4a)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112155522 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
DUF4587
Motif
Other DBs
NCBI-GeneID:
112155522
NCBI-ProteinID:
XP_024142962
Ensembl:
ENSOMEG00000004290
LinkDB
All DBs
Position
LG21:18965976..18997338
Genome browser
AA seq
1023 aa
AA seq
DB search
MVAARTSTRSSQTADWINSLDKRPEERSSEDVDIILARLKKVKAFKGFDPSLLQQICLCG
FYEGLEKGIILYRQGDIGTSWYAVLSGSLDVKVSETSSYQDGVTICTLGTGTAFGESILD
NTPRHATIVTREFSELLRIEQKEFRSLWEKFYFCMAGLLVPPYGVMESTCGSDRLPDKEN
ISNNAFVPLSKHPNKKSLIESPAKPHPKCTSQTPSEKILHAGKVLRNAILSKAPHMIRDR
KFHLKTYRQCCVGTELVDWQMQQSSCVHSRLQAVGMWQVLLEEGVLNHVEQEMSFQDKYL
FYRFLDDEREDAPVPSEEEKRESQEELQETLLFLSQIGPDAHLRMILRKPPPERAADDME
IIYEELLNIKALTHLSTTVKRELAGVLIFESHAKAGTVLFNQGDEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLEEHGQDVLVLEKTLGSARNSADGSSAVHYKYRVMSGTPEKILEHLLKMMRLDSQFTES
DSALDDFVLMHCVFIPNSQLCSLLRAHYHAQASQGSEQEKLDYALNNKRRVICMIMKWAA
VHDDQLQQEDVAFLQEFLISVSNDATWLPALGDQLTELEGVVKRCAEAAMTSQKKHKVFL
RQFSLGEEKPQKRQPIRATDEILFKVYCCDHTYTTIRVPVAASVQEVISAVADKLGSAEE
LNLVHLSSAGEKTIFKPNDVSVFSTLSINGRLFACRRDQLDSLTPLSEQEGPSSGSLASF
ELMSSKDVAYHLTSYDWELFHCVHELELIYHTFGRQHINKTSVNLDLFLRRFNEIQFWVI
TEICLCSQISKRVQLLKKFIKTAAHCKDYKNLNAFFAIIMGLSNPAVSRLSQTWEKLPSK
FKKCYGEFENLMDPSRNHRSYRLIFSKLEPPVIPFMPLLIKDMTFTHEGNKTFIDNLVNF
EKMRMIAKTVKIVRYCRSQTFSEDAPLPSKHHPDVWTYVRQFNVIDNQRILTQLSHGLEP
RRS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgcacgcacctccacgcgttcctcccaaactgccgactggattaatagcctg
gataagagaccagaagagcgttccagtgaagacgtggacatcatcctggcccgtcttaaa
aaggtcaaggccttcaagggatttgaccccagtttgctgcagcagatttgcttgtgtggc
ttctatgagggcttggagaaaggcatcatcttgtatcgccaaggagacattggaaccagc
tggtacgctgtgctgtctggctctctggatgtgaaagtgtctgagacttcaagttatcag
gatggtgtcaccatctgcacattggggaccggaacagcgtttggggagtcgatcctggat
aacacccccaggcacgctaccattgtcactcgtgagttcagcgagctcctacgcattgag
cagaaggagttcaggtctctgtgggagaaattctacttttgcatggccgggttactcgtc
ccaccttacggtgtgatggaaagcacctgcggctcagacagattgcctgataaggaaaac
attagcaacaatgcctttgttccgctttccaaacacccaaacaaaaagtctctcatcgag
agtccagccaaacctcaccctaaatgcacgtctcagacgccctccgagaagatcctacac
gctgggaaggttcttcggaacgccattctctccaaggcgcctcacatgatccgagacagg
aagttccacctgaagacatacaggcagtgctgtgtggggactgagttggtggactggcag
atgcagcaaagctcatgcgtccactcgcgtcttcaggctgtgggcatgtggcaggtgttg
ctggaggaaggtgtcctcaaccatgtggagcaggagatgagcttccaggacaagtatctt
ttctaccgtttccttgacgatgagagggaagatgctcctgtacccagcgaagaggagaag
agggagagccaggaggagctgcaggagactctgctcttcctgtctcagatcggacctgac
gctcacctccggatgattctgaggaaaccaccacctgaaagagcagcagatgacatggag
atcatttatgaggagctgctcaacatcaaggccttaactcatctgtctaccactgtaaag
agggagctggctggagttcttatcttcgagtcccacgcaaaggcaggaactgtgttgttc
aaccaaggagatgagggtacatcatggtacattatcttaaagggttccgtcaacgttgtc
atctatgggaaaggtgttgtctgcacgctgcatgaaggagatgactttgggaagctggcc
ctcgtgaatgatgccccccgcgccgcctccattgtcctgcgagaggacaactgtcatttc
ctgagagtggacaaggaggactttaacaggattttaagggacgtggaggccaacactgtg
cgtctggaggagcacggtcaggatgttctggttctggaaaagactctgggcagcgctcga
aactccgccgacggatcatctgcagtacattacaaatacagggtgatgtccgggacgccc
gagaagattttggagcatcttctcaaaatgatgcgcttggattcgcagttcaccgagtca
gactcagctttagatgactttgtgctaatgcactgtgtcttcataccgaacagccagttg
tgttcattgttgagagcccactaccatgcccaggcctcccagggctcggagcaggagaag
ctggactacgcgctgaacaacaaacgcagagtcatctgcatgatcatgaagtgggctgct
gttcatgatgatcagttgcaacaagaggacgtggccttccttcaggaatttctcatctct
gtgtctaatgatgctacgtggcttccagcccttggggatcagctgacagagctggaagga
gttgtaaagcgctgtgctgaagctgccatgacttcccagaaaaagcacaaagtcttcctg
cggcagttcagtttgggggaagagaagcctcaaaaacgccaacctataagagccactgat
gagattctgttcaaagtctactgctgtgaccacacgtacactaccatccgagtccctgtg
gccgcttcggtccaagaggtgatcagtgctgttgctgacaagctggggtcagcggaggaa
ctgaacctcgtccacctgagctcagccggagagaaaaccatcttcaagccaaacgacgtg
tcggtcttctccacgctcagtataaacggacgtctctttgcctgtcggagggaccagctc
gattcactgactcctttatctgagcaggagggcccttcctccgggtcactggccagcttt
gagctgatgagctccaaggatgtggcttaccacttgacctcatacgattgggagcttttc
cactgtgtacatgagcttgagctcatctaccacacgtttggaaggcaacacatcaataag
accagcgtgaatctggacttattcctgaggaggtttaatgaaatccagttctgggtgata
acggagatctgtctgtgttctcaaatcagcaagagagtgcagctcctgaaaaagttcatc
aagactgctgctcactgtaaagattacaagaatttaaatgccttctttgccatcatcatg
ggactgagtaacccagcagtgagcagactgagtcagacctgggagaaacttcccagtaaa
ttcaaaaagtgttatggagaatttgaaaacttgatggatccttcgaggaaccaccgctca
tatcgcctgattttctcaaagctggagcctcccgtcattcccttcatgcctctgctcatc
aaagacatgacattcacccacgagggcaataaaacatttattgacaatttggtcaatttt
gagaaaatgcggatgatagccaagacggtgaagattgtgagatactgcaggagtcaaaca
ttcagtgaagatgcaccactgcccagcaagcaccacccagacgtttggacctacgttcgc
cagttcaatgtgattgacaaccaaaggatattaactcagctgtctcatggacttgagccc
cgcaggtcttga
DBGET
integrated database retrieval system
