Oryzias melastigma (Indian medaka): 112157830
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Entry
112157830 CDS
T07439
Symbol
knl1
Name
(RefSeq) kinetochore scaffold 1 isoform X1
KO
K11542
protein CASC5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112157830 (knl1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112157830 (knl1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112157830 (knl1)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112157830 (knl1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
KMN network proteins
112157830 (knl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MELT
Knl1_RWD_C
Spc7
Fibin
Motif
Other DBs
NCBI-GeneID:
112157830
NCBI-ProteinID:
XP_024146620
Ensembl:
ENSOMEG00000001870
LinkDB
All DBs
Position
LG24:complement(20476902..20498852)
Genome browser
AA seq
2036 aa
AA seq
DB search
MRAKIYDWDTYLSTTISTLLFCFNANVYVWCYRTTYRKVIGFLQLNMEPQDSEKHNEGSG
FRKRSISSILKAPRKSIILRDLEQQENEVESTKPVEKRNSRRVSFAPANDVLLFANDVKS
ASPVRNPLQELTAPTVVSTQNRAQADPKAENSQQISGIENLLKAPLHVPLQTNTVDPDVW
NEIGEKTMVFSSEDAVMDMTHSHTINISGDADLLGETYLSDRIVEAGLPDLSVNMMTSRS
TDFSGQKGSLSAVASSLDPGFEDFLASLSQQSNSSAGTAFAGPPRQSFGNVVGLSKTQRV
EKQLPGLENSKKKLSVGFGGSMACPEVGMSAEEFLTEPQTGHSLGARDKDDLFQCLFPTL
DMFAEKKGASQQTNRDMHSASPLRQKHGVSSAAKGQKTLTFPAEDDMDITHTVDASSTSS
AKMQTGSSDPSLINHQSKSSDPSLCISEGGWPGKKSSAEPGGVDPEGDVSMEMTEVQTGR
IEGLSDSQDPFQFLIPSQEEVFPPSRSQNRADAASGQENIKGSSSNRGVQTSLKPQSSHR
CQSRVGLDDGEKTIEFAADDDCMDITQSYTANISSSESKQLFSDLGGHEDKTVTFTLTDP
AKEETRSRTVSSGFQNTILQSNEALPSNKDRTVRFTANDVVMDITKSHTVNISSGFAPTF
LQDTKVLPSNGERTVRFTANDAVMDITKSHTVNISSGFQKSIVQDTEALPSNKDRTVRFT
ANDAGMDITKSHTVNISSGFQKTIFQDTEALPSNKDRTVRFTTNDAVMEITKSHTVNISS
GFQETIVQDTEALPSNKDRTMRFTANDAVMDITKSHTVQPTCFKNTEALPSNGEKTTRFT
TSDAAMDMTKSHTVNISSGFQPAFLQNTEVLPSNKDRTMRFTANDAAMDVTKSHTVNISS
GFQPTCHKKNETIVSNGEKTTRFTTSDAAMDVTKSHTVNIDADLKLIQLQSVESIPTNTD
KTQMYDVKEADVTKANTVNTAANLKVLSQSALDVTKEEKPFMPTTTHEAVNVSRFEGIST
SFEPSKDASPSKGDKTVRFTLCDAAMDVTKSHTVNIDADLDAMQQQDVEFLPKTADSARN
HSVLIAPDTHVLPRLTHSDKVKSFRSIAADKAASGMKSFTANISTHLEPVSGQSVETLLM
HDTAMDKTQTLSANIASNLPSDVMFQQNKTLSLHACKPELDLKQKLNKSMSQDSFPVDNL
KTKTMKPLEILEPNSCPSDQKPELFLDKSSADCPQIFEGLDIRRDQTYNTVGQTSAEIQT
RSVFASQDHKVSLESEEVPNPQESITPSQPELMKELEPATLGSLERESPSVDEHGTLKSP
KSRRKSLADLQTKVRRLSHLINVAPDAVAIEMCTSPLPQTDHDLYKNTSDATPAAELQLQ
MASKTETEGQGLCHPEGEQPVATATADATPFRCKTKQLISRLSVGGFKPKLPHRNCPEDP
NKVASTKNVCVINELNNPQEEISNIYDEELDSCEDMSEIIDTRSPERISEKSPPEEFIVD
PLENDEFEEERQGLKRPLTENEDDREDEKRLKASSEFELMSEVGEQDVSRTRTATHTSDS
SSRCEAAFDSTIKNSLFESQLEDSFSDAQKRLEDGTITVSEFFKLFNIDFVIHNPRQSVL
PSRLLSETEMTTMDCLKNRHISRPKQRVYEADIQNLSQEVQRLQVRMWDLQKPLSRVNAP
LWEQIRLFSEKELKAFGAQLKARSNFFRKQSKVQSHLMKEVLYSNLIAAHREEQQTLRGR
LEQADQMMESLDGCIAELEAELAKVEEAGSEDKPSVKSLQEEVEKVTEALADGERLVAEL
ETQKQQNLKQVLKLKEETEKLQTHMDMLDTVNEWRLKETSQTVSIYSFLHDTVSLQLIFS
DSDGSDPEAAAEQRLKDIVFRLNLDDERSHDHARLVHTLVSQFVAGESAWLEKYPTRREV
PKLLHDVSLAVSRCRLLGEELRLLKMWGAMRLQILSLTCTDTRVHVVFSSLKTFSKFKVV
FSVSLAGLVYDLKVESFQSIIGKTSIQQIDDIVASVSPSRNLLTKICRKIHQTLLC
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctaagatttacgactgggatacatacctttctacgacaatttcgactttgctg
ttttgttttaacgcaaacgtgtatgtatggtgttacaggacgacgtaccgcaaagtaata
ggttttttgcagctaaacatggagcctcaagactctgagaagcacaatgaagggagtggc
tttagaaagcgaagcatttcctctattttaaaagcaccaaggaaatcgatcattctacgc
gatttggaacaacaggaaaatgaggtggaaagcactaagcctgtcgagaagaggaattcc
aggagagttagttttgctcccgccaatgacgttcttctgtttgctaatgatgtgaagagc
gcctcacctgttcgaaatcctttacaagaattaacagcaccgacagttgtgtcaacacag
aatagggctcaagctgatccaaaagcagagaacagtcaacaaattagtggtatagaaaac
cttctgaaggctcctctgcatgttcctctgcaaacaaacactgtcgaccctgatgtttgg
aacgagatcggggagaaaacaatggtgttttcgtctgaggacgccgtcatggacatgacc
cacagtcacaccatcaacatcagcggtgatgcagacttgctgggagagacgtacctgtct
gacagaatcgtggaggctggactcccagatttatctgtaaacatgatgaccagcagatcc
acagactttagtggacaaaaaggaagcttatctgcagtagcaagcagcttggatcctgga
tttgaagactttcttgcaagtctctctcaacagagtaactctagtgcaggaacagctttt
gctggacccccgaggcaaagttttggaaacgtggtgggtctgagtaaaacccaaagagtt
gaaaagcagcttccagggttggaaaacagcaaaaagaagctcagtgttggttttggtgga
agcatggcgtgtccagaagtcggcatgagtgcggaggagtttctgaccgaacctcagacg
ggtcacagtctgggagctcgtgacaaggacgacctgtttcagtgtctcttcccaactctg
gacatgtttgcagaaaagaaaggagcatcacagcagaccaacagagacatgcactctgca
agtcctctccgccagaagcacggtgtcagctctgctgccaaaggccagaagacactaaca
tttcctgcggaggatgacatggacataactcacacagtcgacgcttccagcacttcttca
gctaaaatgcaaactggatcttctgacccatcactgattaaccatcagtccaaatccagt
gacccgagcttgtgtatcagtgaaggaggttggccagggaaaaaaagctcagcagagcct
ggcggagtcgatcctgagggcgacgtcagcatggagatgactgaggttcaaacgggacgc
attgaaggactctccgactcacaagatccttttcagtttctcattccgtctcaagaggaa
gttttcccgcccagcagaagtcagaatagagccgacgcggcttcaggacaggagaacatc
aaaggatcgtccagcaatcgaggtgtgcaaacttcattgaaacctcagtcctcacataga
tgtcagagcagggttggtttggatgatggagaaaagacgattgaatttgctgcagatgat
gactgcatggacatcacacagagctacactgcaaacatcagcagcagcgagtcgaagcag
ctgttctcagacttgggaggacatgaagataaaactgtgacgtttactctgacggatcct
gcaaaggaagagaccaggagtcgtactgtttcctctggatttcaaaatacaatcctacaa
agcaatgaggcgttaccctctaacaaggatagaaccgtgaggttcactgccaatgatgta
gtgatggacataacaaagagtcataccgtcaacatttcctctggttttgcaccaacgttc
ctccaagacactaaggtgttgccctctaatggagaaagaactgtgaggttcactgccaac
gatgcagtgatggacataacaaagagtcataccgttaacatttcctcaggttttcaaaaa
tcaatcgtccaagacactgaggcgttaccctctaacaaggatagaaccgtgaggttcact
gccaacgatgcagggatggacataacaaagagtcataccgtcaacatttcctcaggtttt
caaaaaacaatcttccaagacactgaggcgttaccctctaacaaggatagaaccgtgagg
ttcactaccaacgatgcagtgatggaaataacaaagagtcacactgtcaacatttcctca
ggttttcaagagacaattgtccaagacactgaggcattaccctctaacaaggatagaacc
atgaggttcactgccaacgatgcagtgatggacataacaaagagtcacaccgttcaacca
acatgctttaaaaacactgaggcgttaccctctaacggagagaaaaccacaaggttcact
accagtgatgcagcaatggacatgaccaagagtcacaccgttaacatttcctctggtttt
caaccagcgttcctccaaaatactgaggtgttaccctctaacaaagatagaaccatgagg
tttactgccaatgatgcagcgatggacgtaaccaaaagtcacactgtcaacatttcctct
ggttttcaaccaacatgccataaaaaaaacgagacgatcgtctctaacggagagaaaacc
acaaggttcactaccagtgatgcagcaatggatgtgaccaagagtcacaccgtcaacatt
gatgcagatctaaagctcattcagctacagagtgtggagtcaatccccacaaacacagat
aaaacccagatgtacgatgtaaaagaagcagatgtgaccaaagccaatacggtcaacact
gctgccaatctaaaagtcctttcgcaatcagcactggatgttactaaagaggaaaaaccc
ttcatgcccactacaacccatgaagctgtgaatgtgagtcgctttgaagggatttctaca
agttttgagccaagtaaagatgcatcaccttccaaaggagacaaaactgtgaggttcact
ttatgcgatgcagccatggatgtgacgaaaagtcacaccgtcaacatcgacgcagattta
gatgcgatgcagcaacaggatgtggaattcctacccaaaacagcagatagtgcaaggaac
cacagtgtactcatcgctccagacactcatgtccttccacgtctaacccactctgacaaa
gtaaagtccttcaggtccatcgcagcagataaagctgcaagtgggatgaaaagtttcact
gcaaacatttcaactcatcttgaaccagtttctggccagagtgtggagactctcctgatg
catgacacagctatggacaagactcagactctttctgcaaacattgccagtaatttacca
tcagatgtgatgttccagcaaaacaaaactctttctctccatgcatgtaaaccagaactt
gatttgaaacaaaagttgaacaaatccatgtcccaagactcttttcctgtggacaatctc
aaaacaaagactatgaagcctcttgagatcctagaaccaaatagctgtccgtctgatcag
aaacctgagctgtttctagataaaagctcagccgactgtccacaaatctttgaaggtttg
gacattcgtagggatcaaacttacaatactgtgggacaaacttctgctgagattcagact
cggagtgtttttgcatcacaagaccacaaggtgtcattagagagcgaagaggtcccaaat
cctcaagaatccatcacaccaagtcaacctgagctcatgaaagaacttgaaccagcaact
ttaggttcactggagcgggagagcccatctgtggacgaacacggaacgttaaagtcacca
aaatccagacgaaagagtttagctgacctccagacaaaagtccggcgtttgagccacttg
ataaacgtagctcctgatgcggttgccatagagatgtgcacgtcacctttgccccagacc
gaccacgacctttacaagaacacgtcagatgccacacctgcagcagaactgcagctccaa
atggcttccaaaactgaaaccgaaggtcagggtctttgtcacccggaaggagaacagccg
gttgccacagcaactgcagatgcaactcctttcaggtgtaagaccaagcagttgatatca
aggctctctgtggggggattcaaacccaaactcccacacagaaactgccccgaagaccca
aacaaggtggcttccacaaagaacgtctgcgtgatcaacgagctgaacaatccccaagag
gagatcagcaacatttacgacgaagagctggacagctgtgaggatatgtcagaaatcata
gacaccaggagccccgagaggatctcggagaagagtccaccagaggagttcatagtagac
cctctggaaaatgacgagttcgaggaggaacggcaaggcctgaagagacccctgacggaa
aacgaagatgatagggaggatgagaagaggctgaaagcttcctcagaatttgagctgatg
tcagaggttggtgagcaggacgtgagcaggactcggaccgccacacacaccagcgattcc
tccagcagatgtgaagctgcgttcgattcaaccatcaagaacagcctgtttgaatctcag
ctggaagactccttcagcgacgcccaaaagagacttgaagacggtacgataacggtttca
gagttcttcaaactcttcaacatcgactttgtcatccacaatcctcgacaaagcgtcctt
ccgtccagacttctgtcagagacggagatgaccaccatggattgtttgaagaaccgacac
atcagccgacccaaacagagagtttatgaggcagacatccagaacctcagccaggaggtc
caaaggctccaagtccggatgtgggacctgcagaaacctctgagccgagtcaacgcgcct
ctgtgggagcagatcagactcttctctgagaaggagctcaaagcgttcggcgctcagctg
aaggccaggagcaacttcttcagaaaacagagcaaagttcagtcgcacctcatgaaggag
gttctgtactccaacctcatcgccgcccatcgggaggagcagcagacgctcagaggaaga
ctggagcaggccgaccagatgatggagagtctggacggctgcatcgctgagctggaagca
gaactcgctaaagtcgaggaagccggctctgaagacaaacccagcgtgaagtcgttgcag
gaagaagtggaaaaggtgacggaggcgttggccgatggcgagaggctagtagctgaactg
gaaacgcagaagcaacagaatttaaagcaagtcctcaagctgaaggaggaaacggagaag
ctgcagacccacatggacatgctcgacacagtgaatgaatggaggctgaaagagacgagc
cagaccgtcagcatctacagtttcctccacgacaccgtctccctgcagctgatcttctca
gactcggatggaagtgatcctgaggcagcagcagagcagaggctgaaagacatcgtcttc
agactcaacctggatgatgagaggtcacatgaccacgcccgcctcgttcacactctggtg
tctcagtttgttgctggagagtcggcctggttggagaaatacccgacgaggagggaagtc
ccaaagctgctccacgacgtcagcctggcggtgagccgctgccgtctcctgggggaggag
ctacggctgctgaagatgtggggcgccatgcggctccagatcctcagcctaacctgcacg
gacactcgagtgcacgtggtcttcagcagcctcaagacgttctccaagttcaaggtggtg
ttctccgtcagcttggcgggcctcgtctatgacctgaaggtggaaagcttccaaagcatc
atcggaaaaacctcgatccagcagatcgacgacatcgtggcgtccgtcagtccatccagg
aacctgctgacaaagatctgcagaaagattcaccaaacgctgctctgctga
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integrated database retrieval system
