Oryzias melastigma (Indian medaka): 112158406
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Entry
112158406 CDS
T07439
Symbol
lca5
Name
(RefSeq) lebercilin isoform X3
KO
K24828
lebercilin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112158406 (lca5)
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112158406 (lca5)
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112158406 (lca5)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Other domain-containing proteins
Others
112158406 (lca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lebercilin
TSC22
CoV_NSP8
YLR146W-A
Motif
Other DBs
NCBI-GeneID:
112158406
NCBI-ProteinID:
XP_024147520
Ensembl:
ENSOMEG00000016137
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All DBs
Position
LG24:complement(13836873..13842853)
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AA seq
770 aa
AA seq
DB search
MCDHMESDKALDSYGDSRDQSRKSHQSLSKDSKPSSSRKNQNSLQDRIHNEDEKNSSCNS
KSKTRRWDSDPDRDHVSDEEERRSDGSYYSDDYDRESLSERSLSSFSRSRTPSPALQQGM
RAKQAPRNAHRKAGGAGRWGVSRPAGLSLTQQHHRGTRSLSKDSSPPKDLDLVTKRMLSA
RLLKINELRNALTELQQSMEDLKKENRVLKQLQARQEKALRRYDDTESEISLLLARHSNE
THVLRERLRRTQERERVAEQRLKDAEEQLQKRRATIVRLKKLVDQRELGTRDELSRRLDE
EKMKTQEAQQRIKDLERNLELTNSSFQRQIAVEKKKTVSAQEEVRSLQEELQRLTNKLKE
KERDLDTKNIYANRMAKASKKDSEGGTKRKIPGSGSSKGVQTDDRLSSLDFPTPPPAICD
ANEISHQPLGEYISLQQEVDRSDRQTTQKTERTGKEKHLDFKIKLDPGVPEEKPKRLREG
LEKEKEEEEKRTTADLGVNQKEGGALWKHGHVQEEVARWNQESMSNQQAADEVRRKKEQL
LAKMREIDQENLGAPDSRVDESSVLLNKKSSSDQTSPRPLVQRQKNSSTEPEETGRFLAG
IREGGRRRPGLESGAITAPHTQTPTDELAFGGYAPSFGHSPARASFGFPPPPPDLDRSSA
LESICVFSLKRSETEKDKDTDKKVVKDKKSHLMQQLFGSTVDSLSPPSKPELLSSPPPTN
GVHSRRERLINFSSGSPTHQASVNSLRVEESRPAVRAIPSFDDDLEELAL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccacatggagtctgacaaagcacttgactcgtatggagacagtcgggatcaa
agccgaaagtcccatcagagtttatccaaagattccaaaccatcttcctcaaggaaaaac
cagaacagccttcaagaccggattcacaacgaggatgagaaaaatagctcctgtaacagc
aaatccaaaacaaggaggtgggactcggatccagatcgggaccatgtgtccgacgaagag
gaaagacgaagcgacggctcatattattccgacgactatgatagggaaagcctttcagag
cgctcgctgtcttcgttttcccgttctcggacgccgtcacccgccttacaacaagggatg
agagcaaagcaagctcctagaaacgctcaccgaaaagcagggggtgctgggcgctggggc
gtgtctcgtccagctggcctttccctgacccagcagcatcacaggggaacccgatctcta
agtaaggactcatcacctcccaaagacctggacctggtgaccaagcggatgctttctgcc
cgcctcctgaagatcaatgagctgcgcaacgctctgactgaactgcagcagagcatggag
gatctaaagaaggaaaatcgagtcctcaaacagcttcaagcgcgtcaagagaaagctctg
cggcgttacgacgacacggaaagtgagatttctcttttactagcacgccactccaatgag
acccacgtcctccgagagagactcagacgcacgcaggagcgggagcgcgtggcagagcag
cgtctaaaggacgccgaggagcagctgcaaaagaggcgggcgactattgtgcggctgaag
aaactggtcgaccaacgagaactcggaaccagagacgagctaagtcgccggctggatgaa
gagaaaatgaaaacccaagaagcacagcagaggataaaagacctggaacggaatctggag
ctcaccaacagcagctttcaaagacaaatagctgtggagaagaagaagaccgtaagcgct
caggaggaggtccggtctctgcaggaggagctgcaacgactgaccaacaaacttaaggaa
aaagaaagagatctggatactaagaatatttatgccaaccgcatggcgaaagcatcaaag
aaagactctgaaggaggcaccaagcggaaaattcccggctcaggcagctccaagggcgtt
cagactgatgacagattgtcaagtctggattttcccacgccgccccctgccatctgcgat
gccaacgaaataagtcaccagccactcggagaatacatttcacttcagcaggaagttgac
cgaagcgacaggcagacgactcagaagacggagagaacaggaaaggagaaacacctggac
ttcaaaataaagctggacccgggtgttcctgaagagaagcccaagagattaagagagggc
ttggagaaggaaaaggaggaagaggagaaaagaacgacggcagatttgggggtaaaccag
aaggaaggaggggccctctggaagcacggccatgtccaggaagaggtggcgaggtggaac
caggagtcaatgtccaatcagcaagcagcagacgaagtgcgacggaagaaagagcagctg
ctggctaaaatgcgagaaatagaccaagaaaacctaggagctccggactcgagggtggac
gagtcgagtgttctcctgaacaaaaagagctccagtgaccagacttctcctcgccctctg
gtccagaggcagaagaactctagcacagaacccgaggagacgggtcggttcctggctgga
atcagagaaggtggaaggagaagaccgggtttagagagtggagctatcacggcgccgcac
acccaaactcccactgacgaattggcgttcggaggctacgccccgtcgtttggacattca
ccagccagagcctccttcggcttccctccccctccaccagatctggacaggagctcggcg
ttggaaagcatctgcgtctttagtttgaaaaggtcagaaacagagaaggataaagacacg
gacaagaaggtggtgaaggacaagaagtcccacctcatgcagcagctctttgggtccact
gtggacagtttgagtcctcctagtaaaccagagcttctcagcagccccccacctacaaat
ggcgtgcactcacgccgggaaagactcatcaacttcagctcagggtctccaacccatcag
gcgtccgtcaactctctacgcgtggaggaaagccgacccgctgtccgtgccatcccttca
tttgacgacgatttagaagaactcgctctatga
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