Oryzias melastigma (Indian medaka): 112158421
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Entry
112158421 CDS
T07439
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112158421 (dse)
Enzymes [BR:
oml01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
112158421 (dse)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
112158421
NCBI-ProteinID:
XP_024147552
Ensembl:
ENSOMEG00000003376
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All DBs
Position
LG24:complement(23596496..23614375)
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AA seq
954 aa
AA seq
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MRAHTRGAPSVFFILWALLAPASPAEVDPSGGISFMGGNYDGHPMLYFGRGDVEKLQYAA
AGSHRDMARRIREAGEAMLEHPEEYLPPWSPVEFSARWNEVYGNNLGVLSMFCLLYPHRA
GALHLTKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLHEYLNKDQQERFLQV
IGNASRVMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQVLSIM
ERSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFAIGHFSHPWLLQHFAFLYRT
ILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLAEQIHQNRVVEGPGQPGK
GQRWCTLHTEFIWYDPDLIPKPPSDYGAPQLHYFEDWGVVTYGSALPADSNHSFLSFKSG
KLGGRAIFNIVHKNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYSLL
NNVLLFSSGLSGSCFSPWAGQVTEACNSKWLNYKLGLAADSQGSVEAAMKRKGMVFIRGE
GRSAYDPELKIRNFQRNLLLLHPQLLLLVDHIHLEPESPARAVSAFFHNRDLPFHSVKVD
DVYGAFVSHGGLKYKMFWMDDTSSSSRGVVGYWNYPRGYPYNGSNYVNVTMPLRYPHTRM
AYIFFGPDMDVQSFSLRGDNQRVDVYLTTKEHTYTIYLLTGEGITKPLFAMVLMDQKKIV
FERSAAEPDTSPQEVEEYVNVVEDNLQHVKPVFQQMERHILGRVLNSASFRKTAERLLHF
SDKRKTEEVIERMFAMSKKQSKSKGDKKMSFGEKLSENMPDIFAQVEVTEKKERQRTSKR
VYEYSPEEGDADSRAFMDYADGRRNRKGGFVKGRRFKEVHEAATAGSEGLSSTASYIRLF
LLLNTATFFLLLAVLLTRFQRGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQC
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagagcccacacccgtggggcgccctcagtcttcttcatactgtgggccctgcttgct
ccagcttccccggcagaagtggaccccagcggggggatttccttcatgggaggcaactat
gatggtcatcccatgctgtactttggtagaggcgacgtggagaagctgcagtacgccgcg
gcgggaagtcaccgggacatggcccggagaatccgtgaggctggggaagccatgctggag
cacccagaggagtacctgcccccctggagccccgtggagttcagcgcccgctggaacgag
gtgtatgggaacaacctgggcgtgctgtccatgttctgcctgctgtatccgcatcgggcc
ggggccctccacctgaccaaggactacatggagaggatggcggcgcagcctagttggttg
gtcaaggacgccccgtgggacgaggttcccctggctcactctctggtcggcttcgccacg
gcctacgacttcctgcacgagtacttaaataaggaccaacaggagcgcttcctgcaggtc
atcggcaatgcttcacgcgtcatgtatgagaagtcctacgttcgagggtgggggttccaa
tacctgcacaaccatcagcccaccaactgtgtggctctgctcacaggaagtctggtttac
atgacccaaggttacctccaggaggcatacttgtggaccaaacaggttttgtccatcatg
gagaggtctatggttctgctgcaggacgtgacggatggctcgctgtatgagggcgtggcc
tatggcacctacaccacccgttctctgttccagtacatgtttctggtacagcgccacttc
gccatcggccactttagccatccctggctgcttcaacacttcgctttcctctacaggacc
atcctccccggctttcagaggactgtggccatcgcagattccaactacaactggttttac
ggtccagagagccagctggtcttcttggaccgctatgtgttgcgtaatggaagtggaaac
tggctggcagagcagattcatcagaacagagtggtggaagggccaggtcagccggggaaa
ggccagcggtggtgcacactccacacggagttcatctggtatgatccagacctgatcccc
aaacctccttcagactacggagctcctcagcttcattactttgaggactggggcgttgtt
acctacggcagtgctttacctgcagactccaaccactcctttctgtcctttaaatctgga
aaactgggaggtcgtgccatttttaatattgttcacaagaacaagtacaaggagtggatc
aaaggttggaggaactttaatgccggtcatgagcatcctgaccagaacagtttcactttt
gctcccaacggcgtcccgttcatcaccgaggcgctgtacggccccaagtactctctgctg
aacaatgttctgttgttcagctcgggcctctcggggagctgcttcagcccttgggctgga
caggtcacagaggcctgcaactccaagtggttgaactacaagttgggcctcgccgcagat
tctcagggcagcgtggaagctgccatgaaaaggaaaggaatggtcttcatccgaggtgag
ggacgttcagcgtacgacccagaactgaagatcaggaacttccaaaggaacttgctcctg
cttcacccacagctcctgctgttggtcgaccacatccaccttgagccagagagtccggcc
agagccgtgagcgcctttttccacaacagagacctgccttttcacagtgtgaaggtggat
gacgtttatggagcatttgtttcccacggagggcttaaatataagatgttttggatggat
gacaccagcagcagcagcagaggggtggtaggctactggaattacccccgggggtacccc
tataacggctccaactatgtgaatgtcacaatgccattacggtacccacacacaaggatg
gcctacattttctttggacctgacatggatgtacagagtttcagcctacgcggggacaac
cagagggtggatgtttacctcaccactaaggagcacacctacactatctacctgctgact
ggagagggcattactaagcctttgtttgccatggtgctgatggaccaaaagaagattgta
tttgaaaggtcagcagcagaaccagacacttcaccccaggaagtggaggaatacgtcaac
gtggtggaagacaacctccagcacgtcaaacctgtcttccagcaaatggagaggcacatc
ctcgggcgggtcctcaacagcgccagcttccgtaaaactgcagagcgcctcctgcacttt
tctgacaagaggaagacagaagaggtcatcgagaggatgtttgccatgtccaagaagcaa
agcaaaagcaagggggacaaaaagatgagctttggggagaagctgtccgagaacatgccg
gatatttttgcgcaggttgaagtgactgagaagaaagagagacagaggacttcaaagcgt
gtgtatgaatacagtcctgaggaaggagacgcagactcgcgcgctttcatggattatgca
gacggccgcaggaacagaaaggggggctttgtgaagggtcgcagattcaaggaggttcac
gaggcggccacagcggggagcgagggtctgtccagcacagcctcttacatcaggctcttc
ctcctgttgaataccgccaccttcttcctgctgctggcagtcctgctgacccgcttccag
agggggcgcagcctgcacacacagaggtgcttctacaccatccttctgattgactgcttc
atcctgctgtacctctactcctcctgctcccacacacagtgctaa
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