KEGG   Oryzias melastigma (Indian medaka): 112158825
Entry
112158825         CDS       T07439                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oml03037]
    112158825 (ift122)
Cilium and associated proteins [BR:oml03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   112158825 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_EML_2 WD40_WDHD1_1st Zn_ribbon_IFT122_C WD40 Zn_ribbon_IFT122 WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 TPR_IF140-IFT172 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st TPR_GEMI5 WDR90_beta-prop_4th TPR_2 Beta-prop_Vps41 eIF2A WD40_MABP1-WDR62_1st TPR_7 Beta-prop_WDR75_1st TPR_COPA_B Beta-prop_IFT140_2nd TTC7_N
Other DBs
NCBI-GeneID: 112158825
NCBI-ProteinID: XP_024148187
Ensembl: ENSOMEG00000008964
LinkDB
Position
LG7:complement(13199312..13224861)
AA seq 1185 aa
MRAAQVWQDKICERVYDVAFKPDGSQLIVAAGLRVLVYDAADGANIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSGDFGLWS
PEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSSSPIW
SIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGADRTLSYDPCCVSYFTKGEYIVMGG
SDKQVALYTKDGMRLGTIGEQNSWVWTCRVKPESNCVVLGCQDGTIACYQLTFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIRCRELVKKIAIYRSRLAIQLPERILIYELRSDDF
SDMHYHNKEKICQKFECNLLVVCSQHIILCQEKRLQCLSFTSVKEKEWVMESLIRYIKVI
GGPPGREGLLVGLKNGAILKIFVDNPFPITLLKLSTSVRCLDMSAYRKKLAVVDEHNTLL
VYDINSKELLFQEPNANSVAWNTQCENMLCFSGNGYLNIKASNFPVHQQKMQGFVVGYNG
SKIFCLHVYFMSAVEVPQSAPMYQYLEKKLFKEAYQIACLGVTDSDWRDLATEALEGLDF
ETAKKAFIRIRDLRYLDLISSIEERKKRGENDNELFLADVYAFQGKFHEAAKLYKRTGHE
SRAMNMYTDLRMFDYAKEFVGTTDVKSSRMLMAKQADWAKSSNEPRAAAEMYLSAGEHMK
AIDIIGEHGWVDMLIDIARKLDKAEREPLTKCALHLKRLKHHGYASEIYSKMGDLKALLQ
LHVDSKHWEEALSLVEKHPQFKCDVFVPYAQWLAENDRFEEAQEAFHKAGRQDSAVKVLE
QLTHNAVVENRFSDAGYYYWMLSMQCLDIARDNEDQRNEMLTKFERFQHLAELYHVYHSV
QRYTDEPFSSDIPETLFNICRFLLNNLTKEKLLGISKVKTLYTLAQQSQKLGAFRLARSC
YEKLLELHVPSRFQAAIERGTLVIRAKPCHDSEELTEAMMCYRCSNNNPLLSNQGSMCIN
CKQPFIYSASSYEVLPLVQFYLEEGISDDEALSLIDLEVPHTDQGKAQEQDMNNSDLQTL
KINDDLDSEGDHPPFTAKISFEQGGSTFVPVKVSRSGLLSMSRRDVLIKRWPAPLQWEYF
NSLLPDVSITMCPTCFKMFETEDYELLVLQHNCCPYCRRPIDEPH
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgagagcagcacaagtatggcaggataaaatttgtgaacgtgtttatgatgttgctttc
aagccagatggaagccagctcattgtagcagcagggctccgcgtgttggtttatgatgct
gcagatggagctaatatccagccgttaaagggacataaagacactgtgtactgtgtggcc
tatgcaaaggatggtaaacggtttgcttcagggtcagctgacaaaagcattataatatgg
acctcaaagctagagggtattttgaaatacactcacaatgattctatccagtgcgtttca
tataatccagtcactcaccagcttgcttcttgctcttctggtgactttggtctgtggtct
ccagagcagaaatctgtaaataaacataaagtgagcagcaaaataacatgttgtgggtgg
acaaatgatgggcagtacctcgccctcggcatgatgaatggtgtggtgagcatacggaac
aagaacggggaggagaaggtcaagatagaacgtccaggaggctcctcttcccctatttgg
tctattgcttggaatccctccaaggatgagcacaatgacattttggctgtggcagactgg
ggtcaaaagctctccttctaccaactcagcggaaagcagatcggagcagacaggacttta
agttatgacccgtgttgcgtcagctatttcaccaagggggagtacatcgtgatggggggc
tcggataagcaggtggcgctctacaccaaagacggaatgcgattgggaaccatcggagaa
cagaattcctgggtgtggacatgccgagttaagcctgagtccaactgtgtggtgctgggc
tgtcaggatgggaccattgcttgctatcaacttactttcagtacagttcacggcctctac
aaggatcgctatgcttatagggacagcatgactgacgtcatcgtccagcatctgatcaca
gagcaaaaagtgagaattcggtgtcgtgagctggtgaagaagatcgccatctacagaagt
cgccttgccatccagctacctgagaggatcctcatctacgagctgcgatccgatgacttc
tctgacatgcactaccacaacaaggagaaaatttgtcagaagtttgagtgcaacttgctg
gttgtgtgctcccagcacatcattctgtgtcaggagaagagacttcagtgcctttccttc
accagcgtcaaggaaaaagaatgggtgatggagtctctgattcgctacattaaagtgatt
ggaggtccaccaggcagggaaggcctgcttgtgggactaaagaacggagctatcctgaag
atatttgttgacaatccatttcccattacactgctgaagctgtcaacttctgtgcgctgt
ttggatatgagcgcctaccgcaagaaactggccgtggtggacgagcacaacactcttcta
gtgtatgacatcaacagtaaagagctgctctttcaggagcctaatgctaacagtgtagcc
tggaacacccagtgtgagaacatgctctgcttctcgggtaatggctacctcaacatcaag
gcgagcaacttccccgttcaccagcagaagatgcagggcttcgtcgtgggctacaacggc
tccaagatattctgcctccacgtgtacttcatgtctgctgtggaagtgccccagtccgct
cctatgtatcaataccttgagaagaagctctttaaggaggcctaccagatcgcctgtctg
ggggtgacagacagtgactggagggatttggcaacagaagctttggaaggacttgatttt
gaaacggccaaaaaggcttttattagaatccgagacctgcgctacctggatttgatcagc
agcattgaggagaggaagaagcggggtgagaacgacaatgagctgttcctggcagacgtc
tatgccttccaggggaaattccacgaggcagccaagctgtacaaacgcaccggccatgaa
tccagagccatgaacatgtacaccgatctacgaatgtttgactacgccaaggagtttgtg
ggaacaacagatgtgaagagttcccggatgctgatggctaaacaagcagattgggctaaa
agcagcaacgaaccccgagccgctgcagagatgtacctatcagctggagaacacatgaaa
gccatagatattattggagagcacggttgggtggacatgctcatcgacatcgctcgaaag
ttggacaaggctgagcgcgagccactgacgaaatgtgcacttcacctcaagaggctgaag
catcacggctacgcctcagagatctattccaagatgggcgacttgaaggccctgctccag
ctgcatgtggacagcaaacactgggaagaggcattgtctttggtggagaagcatccccag
ttcaaatgtgacgtgttcgtgccatacgcccagtggctcgctgaaaatgaccgctttgag
gaagcacaagaagcatttcacaaggctgggcgtcaggattcggctgtgaaagtcctggag
cagcttacccacaatgcagtggtggagaacaggttcagtgatgcaggctattattactgg
atgctgtctatgcagtgtttggacattgctagagataatgaggatcagaggaacgagatg
ctgacgaagtttgaacgttttcagcatctcgctgagctttatcacgtctaccactccgtt
cagcgttacacggatgaacctttcagttcagacatcccagagaccctcttcaacatctgc
aggttcctcctgaacaacctcaccaaagaaaagcttctggggatttctaaagttaaaacc
ttgtacacgttggcgcagcagagtcaaaaactgggcgcattcagactcgccaggtcttgc
tacgagaaactcctggagctccacgtcccctcacgcttccaggcggcgatagaacggggc
acgctggtcattcgtgccaagccctgccacgacagcgaggagctgactgaagccatgatg
tgctaccgctgctccaacaacaatccacttctgagcaaccaggggagcatgtgcatcaac
tgcaagcagccttttatttactccgcctcatcttatgaggtgctgcctttggtgcagttt
tatctagaagaaggtatcagcgatgatgaggctctgtctcttattgacctggaagttcct
cacacagatcaaggaaaagcacaggagcaggatatgaacaacagcgacctgcagactttg
aagattaatgacgatttagactctgaaggagatcatccaccattcacagccaaaataagc
tttgagcaagggggctctacctttgtcccggtcaaggtgagccgttcggggctgctctcc
atgagcagaagggatgtcctgataaagcgctggcccgcgcctctccaatgggaatacttc
aactccctgctgcctgatgttagcatcaccatgtgtcctacctgcttcaagatgtttgag
actgaggattatgaacttctcgtgcttcagcacaactgctgcccttactgtcgcagaccc
atcgacgaaccacactga

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