Oryzias melastigma (Indian medaka): 112159183
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Entry
112159183 CDS
T07439
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112159183
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112159183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
Nipped-B_C
HEAT
Motif
Other DBs
NCBI-GeneID:
112159183
NCBI-ProteinID:
XP_024148857
Ensembl:
ENSOMEG00000014881
LinkDB
All DBs
Position
LG7:complement(9598942..9613620)
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AA seq
713 aa
AA seq
DB search
MMVPEPLRSAMVSDVGEDTSLALPSDNSLSTGQQRVLNQVHTIKRSKFKQSKIISPPAST
GMAQQTSTTSSDFGTFKFSPSKVNGTFSPTNSSISTGFSKGVNSQRSRTISGKAGRNFSS
SGTWDQQVNNHTKSQKSNGLKHSRSDPALAPPVSLPPAPSMRVKGQIPQGQTTSQAQINR
LATSSMVNDVFMTNTLRSPSFHSQQDGKLGTLKSLKMEQRSIVYPPTGMADITLKEAVDF
LSSPEESYQHRGASFIQHTTFKEPDTKTEVLQLGGIPGLVTLLRSPNPGVSQVAAGALRN
LVFNNKKNKLEVQHCDGIAKALQLLKETDSTESQKQITGLLWNLSSAEELKKELTTTAMP
VLTEHVVKPFTLLSDSSTITYVDPAVFNCATGCLRNLSCGEEQERNSMRSCKGLIDSLIS
YIRSCVAEGNPDDLSVENCTCILHNLTFQLEDEYPESFSHYQLSEAQQEAKKSSTVGCFS
PRSSKAQKEIIYDMEKAPAADSEVSGVQWLCHPKAVEAYLSLLSSSEKDATLEASCGALQ
NLTAGRKGSSAVSGVLLEKLKSAFVLPSLLKSPNKNLQKTTLSLLDNLSRNKSSQVSMAR
QVLPHLSSLLSSESTDTGISDDIVATACSTARRLVLADNELNKKVISTDLVNFLMDLSSN
ESLPKASKEASLLLYSMWNEKNLQSIVKKLGFKKAAFVNETTIKAHHSVVYIE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatggttccggagccgctgcgctcggcgatggtcagcgacgtcggggaggacacttcg
ctcgcgctgccgtccgataacagcctgagcacggggcagcagcgcgtgctcaaccaggtc
cacaccatcaagaggagcaagttcaaacagagcaagatcatcagtccacctgcttcgaca
ggcatggctcagcagacctccacaacttcaagcgattttggaacgttcaagttttctcca
tccaaagtaaacggcaccttcagtcccaccaactccagcatttcaaccggcttcagcaaa
ggggtaaattcccaaaggagtcgtactatatctggaaaagcaggaagaaatttcagttct
tccggcacttgggaccagcaagtcaacaatcacaccaaatcccagaaatccaacgggctg
aaacacagtcgcagtgaccctgctctggctccgcctgtgtctttaccacctgcaccgagc
atgagagttaaaggacagatccctcaaggccaaaccacctctcaggctcaaataaatcga
cttgccacctcctctatggttaatgacgtgtttatgactaacaccctccggtcgccctcc
ttccactcccaacaagacggcaagcttggtactctgaaatcattgaaaatggagcagaga
tcaattgtgtaccctcctactggcatggcagatataaccctgaaggaggctgtggacttc
ctgtcctcccctgaggagagctaccagcaccgtggagccagcttcattcaacacaccacc
ttcaaagagcctgataccaagacagaggtgttacaacttgggggcattccaggtctggtg
accctgctgcgaagccccaacccgggtgtgagccaggtggcagccggggcgctgaggaac
cttgtgttcaacaataagaagaataagctggaggtccagcactgtgacggaatagcaaag
gctttgcagctactgaaggagacagattctaccgagtcccagaaacaaatcactggcctg
ctgtggaacctgtcatccgctgaggagttgaagaaagagcttacgaccaccgccatgcct
gtcctgactgaacatgtggtcaaaccgttcaccctgctgtcagactcctccaccatcacc
tatgtcgacccggccgtcttcaactgtgcaacaggctgccttcggaacctgagctgtgga
gaggaacaggagaggaattcaatgagaagctgcaaaggcctcatcgattcacttataagt
tacattcggtcctgtgtggcagagggaaacccagatgacttgtcggtggagaactgtacg
tgcattctccataacctgaccttccagctggaggatgagtacccggagagtttcagtcac
tatcagctttcagaggcccaacaagaagcaaagaaatcgtccacagtgggatgcttcagc
cctcggagcagcaaagctcaaaaggagataatttatgacatggagaaagctccagcagca
gacagtgaggtgtcaggggtgcagtggttgtgccaccctaaagctgtagaggcgtatctg
tctctgctaagctcctctgaaaaagacgccactcttgaggccagctgtggagctctgcag
aacctcaccgccggccgaaagggatcctctgctgtgagtggagttctgcttgaaaagttg
aagagtgcgtttgtcttgccttctctgttgaagtcgcccaacaaaaacctccaaaagaca
actctgtccctgctggacaacctgtctcgcaacaagagctctcaagtctccatggcaagg
caggtgctgcctcacctcagcagccttctctcctccgagtcgacggacacaggaatctct
gacgacatcgtagcaacagcttgcagcacagctcggagactggtgctcgccgacaacgag
ctcaacaaaaaggtcatcagcacagacctggtcaattttctgatggatctgagctcgaac
gagtcacttcccaaagctagcaaagaagcctcgttgctgctgtacagcatgtggaatgag
aagaatttacaaagcattgtgaaaaagttgggattcaaaaaagctgcttttgtaaacgaa
acaaccatcaaagcacaccactccgttgtgtacatcgagtga
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