Oryzias melastigma (Indian medaka): 112159286
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Entry
112159286 CDS
T07439
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112159286 (plxnd1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
112159286
NCBI-ProteinID:
XP_024149045
Ensembl:
ENSOMEG00000009160
LinkDB
All DBs
Position
LG7:13118533..13192894
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AA seq
1899 aa
AA seq
DB search
MPPSMEIAVLLLGVLALETRRSASALHIQQAFASPNQTNNFVVEPVSRRVYLATVNTVYQ
LNRTLIVEAQKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNYNKLLKLDREQGVVVVCGS
VYQGFCELRKMENISEIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLIFRSHGGNSRLL
VGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNIKDLSRLFTYDISPSDENVFKIKQ
EVKTKNKLNFVHAFIQKTYSYIAFNNDAKIGHKESQPNSILARICLDTDNPRQLAGLESR
KLTESYIQMPLQCGSSRNIYNRLLSVYSAEINAEDASGPEPYLFGVFSKADRKSALCAFR
FGDVEEEIRQSRMNCSSSPSSDVHVLDSVNQGSGSACIQKKNLQLTPNQLDCGAAHLQHP
LALQRPLRALPLFEYSGLTSVSVDNVHNHTVVFLGTSKGRLRKLTLLSNMTVASQSTLKL
PSGEAVHPIMTFDPSDRNFLYVMTSHHMLRIKVAECDQWKSCRSCLGAGDAYCGWCTLEN
RCSIQEECAQGLLARSWISMGEGPQQCPSITLTPPEISISADIKDVGILINGTVPDLIGS
RVECEYWPGVSTAATLHLDHGPAQIQTCPLPPRENYHPILPGTDHRSISVVIKVNGTSVV
SGSFIVYDCERTGEIHPTKSCESCLSTQWKCYWDQENHLCVSSKDDSKHNLLESAASCPK
LVPSMVPPSPSGMVQDFTLSLVNIQEKENLECDFGMEQQYEATWLDDSTVKCSGVTLSTN
QRSQVFFLNLRSKGDFSAQREDIFIDSPHPIKVEVYNCGVGSSDCSQCWGREVQGHLCAW
CDNSCRPRDDCQPNEDQCPAPEIHRISPLRGPVDGGTLLTVQGKNLGRRAERVKVSIGDV
PCYLLPERYTVSVELVCRTGKSVHDRTDVVQVEVDQSGNGVSKESFSYLTPKLLSLDPKK
GSLSGGTRVTIRGEHLDIGSQVRVTVNNTLECTIIEKTDQTIECIMPKAVHAHAELVKVC
VEFEDQPCQEEDLQQTYRYEENSYIASIHPERSFLSGGRTITVAGQGFDLVQTVTMQVLE
IGEVDCSVVSTSMILCKSPPSSQPQETSVQFFLNGLLYVRNNPSTSKDKLEEEEEDPLTS
HFMLEYVEDPQFFTATREKLIKHHSGEPLTLIINKVPSNLELQPEEYSVMIGSYPCNISF
HNDQLFHCTINGLPSSSERELPVTVKVGNFDHIIAKVQLGGSELAIVVSIVVCCVLLLLC
TVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGI
PFLEYKQFVTRTFFPKMCSDYEKSLVKHAYENDSLGPRAVPETHPLLQDWQATETTRPNV
EEGITLFSTLLNNKHFLITFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKDL
LVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQIN
KGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLSVRVMNTDTICQVKEK
IIEAFYKNLPFSQWPRAEDVDLEWFDSGSNSKLLQDLDNTSVMEDGRKKLNTVFHYQVPE
GASLAMSMKDKKENTLERVKDLDTEKYVHLVLPHDELFENSKGHRHSHRKKVLPEIYLTR
LLSTKGTLQKFLDDLFQAILSIPPDCPPLAVKYFFDFLEEQADKRGITDPDTLHIWKTNS
LPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAK
EIPEYKKRVQCYYQQIQDMPPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYNYAKRYRN
QVANALEANPTARRTQLHHKFEQVIALMEDNIYECCSEA
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcgatggagatagccgttctgcttctgggcgtcctggctttggagacgcgc
aggagcgccagcgcgctgcacatccaacaggcgttcgcgtctccaaaccagaccaataat
ttcgtggtggaaccggtttccagaagggtctacctggccaccgtcaacacagtttaccaa
ctgaacaggaccctgattgtggaggcgcagaagagaacgggaccggtggaggacaacctg
ttgtgccatgcgccacagctgccccaggctccgtgcgagcaccccaaatccctcacagac
aactacaacaagctcctaaagctggaccgggagcaaggggtcgtggtggtgtgtggatct
gtgtatcagggcttctgtgagctgagaaaaatggaaaacatctccgagatagcggtggag
tttcctccccagggcgagaagaccgtcttccccagcatgctcaacatcgctgccaatcac
ccgaacgcatccactgtcggactcatcttcaggagccacgggggtaattcaaggttacta
gttggggcaacatatacaggggctggaacccagtttttccccaagaaccacagcaaggag
gacttgcgttttgaaaacaccccggagatcgccatccgctccttaaacatcaaggattta
tccagacttttcacctatgacattagcccctcagatgaaaacgtgtttaagatcaaacaa
gaggttaagaccaaaaacaaactcaactttgtccacgccttcatccaaaagacttattcc
tatattgccttcaacaatgacgcgaaaattgggcacaaggagagccagcccaacagcatc
ctcgccaggatatgtctggataccgacaacccccggcagctcgcgggactggagagcagg
aagctcacggagtcctacatccagatgccgctccaatgtggatctagcaggaacatctac
aaccgcctgctgtctgtgtactccgcggagatcaacgctgaggacgcgagcggcccggag
ccgtacctgttcggagtgttttccaaagcggacagaaagtccgctctgtgcgccttcagg
tttggagacgtggaagaggagatcagacagagccgcatgaactgctccagctcccccagc
agtgatgtgcacgtgctggacagcgtcaaccagggctcggggtcagcctgcatccagaag
aaaaacttacagttgacccccaatcagctggactgtggcgcagcccacctgcagcacccc
ctggctctgcagaggcccctgagggccctccctctgtttgaatactcaggcctcacttca
gtatcagtggacaatgtgcataaccacactgtggtttttttgggaacaagtaaaggacga
cttcgcaagttgaccctcttgtcgaacatgaccgtggccagccaatccacgctgaagctg
ccatccggcgaagcggtccaccccatcatgacctttgaccccagcgacaggaactttcta
tatgtcatgacctctcaccatatgctgagaatcaaagtggcagaatgtgaccagtggaag
agctgcaggagctgtttgggggcaggagacgcctactgcggctggtgcactttagaaaac
agatgtagcatccaggaggagtgcgctcaggggctcttggcacgttcctggatcagcatg
ggtgaaggcccccagcagtgtccatccattactctgactccccctgaaatcagcatctct
gcagacatcaaggatgttggcatattgattaacggcacagtccccgatctgatcggctcc
cgtgtggagtgcgagtattggccgggagtctccaccgcagccacgctccacctggaccac
ggtcccgcgcagatccagacctgccccctgcctcctcgtgaaaactaccacccaatcctc
cctggcacagatcaccggagcatttctgtggtgataaaagtgaacggcacatccgtggtg
tctgggagcttcatcgtctacgactgtgagaggaccggagagatacaccctacaaagtca
tgtgagagctgcctctccacccagtggaagtgttactgggaccaggagaatcacctctgc
gtgtccagtaaagatgactcaaaacacaacctattggagagtgcggcttcctgtcccaag
ctggtcccttcaatggttcctccatcaccgtcaggaatggtccaagacttcaccctgtcc
ctcgtcaacatccaggagaaggagaacttggagtgtgactttggaatggagcagcaatat
gaagccacatggctggacgactcaaccgtcaagtgcagcggggtgacactgtccactaat
cagaggagtcaagttttcttccttaatctgaggagcaaaggagacttcagtgctcagaga
gaggacatattcattgacagccctcatccaatcaaagtggaggtgtacaactgtggagtt
ggaagctcggactgctcccagtgttggggccgtgaggtgcagggccacctctgtgcctgg
tgtgataacagctgcaggccgagggatgactgtcaaccaaacgaggaccagtgtcccgct
cctgagattcacagaatctcgcccctgaggggtcctgtggatggaggcactctgctgacg
gtacagggcaaaaaccttggtcgcagggcagaaagagtgaaggtctctataggggatgtg
ccttgttatctgctgcctgagcgctacaccgtctctgttgagcttgtgtgtcgcactggg
aagtctgtgcatgacaggacggatgttgtccaagtggaagttgatcagagtgggaatggc
gtgtcgaaggagagcttctcatatttaaccccaaagctgctgtccctggatccaaagaaa
ggctctctttccgggggaacccgagtgaccattagaggggaacatctggacattggctcc
caagttagagtcacggtcaacaacacactggagtgcaccatcatagagaaaacggatcaa
acgatcgagtgcattatgcccaaagctgtgcacgcacatgctgagttggtgaaagtgtgc
gtggagtttgaagaccagccctgtcaggaggaagacctccaacagacttatcgctatgag
gaaaactcctacattgcctccatacacccagaaagaagcttccttagtggtggcaggacc
atcactgtcgccggccaaggctttgatctggtgcagactgtcaccatgcaagtgctggaa
attggagaagtggactgctcagtggtgtccacctccatgatcctctgcaagtcccctcca
tccagccagccccaggagacttcagtgcagttcttcctgaatggactactctatgtgagg
aacaacccttctacctctaaagataaactagaggaagaggaggaagaccccctcacgagc
cacttcatgttggaatatgtggaagaccctcagttctttactgcaaccagagagaagctg
ataaaacaccattcaggagaaccgctgacgctcatcatcaataaagtacccagcaatctg
gagttgcagccagaggaatactctgtgatgattggctcgtatccctgtaacatcagcttc
cataatgaccagctgttccactgcaccatcaacggactacccagctccagcgaaagggag
ctgcctgtcactgtaaaagtggggaactttgatcacattattgctaaagtgcagctcggc
ggcagcgagctggccattgtggtatcaattgtggtgtgctgcgtgctgctccttctgtgc
actgtggctcttgtggtgtactgcacaaagagccggagggcagagcgttactggcaaaaa
acgctcctccaaatggaagagatggagtcacagatcagagaggagatccgaaaaggcttt
gcagagctgcagactgacatgacagatcttaccaaggagctgaatcgcagccagggcatc
cccttcctggagtacaaacagtttgtcacacggacgttcttccccaagatgtgttcagat
tacgaaaagagtctggtcaagcacgcctacgagaacgattccctgggaccccgagcggtg
ccagagacacacccactgcttcaggattggcaggccaccgagacaacgagacctaatgtc
gaagagggcatcactctgttctccactctcctcaataataagcacttcctcatcacgttt
gtccacgccttggagcagcagaaggactttgctgtgagagacagatgcagccttgcatcc
ttgctcaccatcgccctccatggtaaactcgagtactacaccagcatcatgaaagacttg
ctggtggatctgattgatgcttcagcttccaagaaccccaaactgatgctgcgccgcacc
gagtctgtggtggagaaaatgctcaccaactggatgtccatctgcatgtacagctacctc
aaggaaacagtgggtgagccttttttcctgctgctttgtgcaatcaagcagcagatcaac
aaaggctccatagacgccatcactggaaaggctcgctacactctgaatgaggagtggcta
ctccgtgagaacattgaggctaagccacagaacatcaacgtgtcattccagggctgcggc
atggactcgctgtcagtcagggtcatgaatactgacacaatctgtcaggttaaggaaaaa
atcattgaagccttttataaaaatctgcctttctcccagtggcctcgagcggaggatgtg
gacctggagtggtttgactctggcagcaacagtaagctactacaggacctggacaacaca
tcggtgatggaggacggtcgaaagaagctcaacacagtcttccattatcaggtcccagag
ggagcttcgctggccatgagcatgaaagacaagaaagagaacaccctggagagagtcaaa
gatctggatacagaaaagtatgttcatttggtcctacctcatgatgagctctttgaaaac
agtaaaggccacaggcatagccatcgtaaaaaagtactgccagaaatctacctgacgcgc
ctgctgtccacaaagggaactctgcagaagttcttagatgacctcttccaggccatcctc
agcatccctccggactgcccccctctggctgtcaaatacttctttgacttcctcgaggag
caagctgacaaacggggcatcacagacccagacaccctgcacatctggaaaaccaatagc
ttacctctgcgtttctgggtgaacatcttgaagaacccgcagtttgtgtttgacatcgat
aagacagatcacatggacgcttgcctatctgtcatcgctcaggctttcatcgacgcttgc
tctatttctgacctgcaactcggcaaggattctcctaccaacaagctactgtatgccaag
gaaatccctgagtacaagaagagagtgcagtgctactatcaacagatccaggatatgcct
cctctcagtgaacaggagatgaacgctcacctggcagaagagtcaagaaagtaccgaaat
gagtttaacaccaacctggccttgacagaaatctacaattatgccaagagatacagaaac
caggtggcgaacgctctggaggctaaccccaccgcacgtcgcactcagctgcaccacaag
ttcgagcaggtcatcgctctcatggaggacaacatctatgagtgctgcagcgaagcttga
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integrated database retrieval system
