Oryzias melastigma (Indian medaka): 112160006
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Entry
112160006 CDS
T07439
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112160006 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
112160006 (raph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
PH_11
PI3K_rbd
RBD
Motif
Other DBs
NCBI-GeneID:
112160006
NCBI-ProteinID:
XP_024150072
LinkDB
All DBs
Position
LG2:2966647..3028367
Genome browser
AA seq
1470 aa
AA seq
DB search
MEQLSDDELDHGAEEEDSDKEDQDLDKMFGAWLGELDKLTQSLDDGRPQKALQKPPLRQE
TNMANFSYRFSMYNINEALNQGDSVDLDALMADLCSIEQELSTISKPNSSSRSHSKGQQR
APGGRSASTKHSGSGGGGSSGGSTSSSTRASPANTVRGGSLNARPAASNISLDDITSQLE
KASLSMDEAARQTSSSSSSSSSSVSSATLRRPSSESSGGGKHRRTGSVDAVSEKEAGSQR
SSVNSASASSMDSLDTDKAPAGGEGEGQSGVGPQGQNQTSTEHVTLRRASSKAARRQLDF
TSGRGEVDRATHSYLDRETSLILKSIAGKPSHLLTKEEQAAKLKAEKIRVALEKIKEAQV
KKLVIRVHMSDESSKTMMVDERQTVRQVLDSLLDKSHCGYSPDWSLVETITELQMERIFE
DHENLVENLLNWTRDSHNKLMFIERIEKYALFKNPQNYLLGRKETSEMADRNKEALLEEC
FCGGSVSVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKASRDLVCFLQLDHV
NVYYGQDYRSKYKAPTDYCLALKHPQIQKKSQYIKYLCCDDVRTLHQWINGIRIAKYGKQ
LYVNYQEAMKRTEAAYDWSSLSTSSIRSASSSASIPESQSNHSGHSDSGVDTGSSHGRSQ
SVVSSIFSEAWKRGTQMEESSKIRTESSRGSTHSSSHGHRHHSQHSLDQPLHTPPPQTPQ
QLPSAQHQPPQIWSGQQTPPPMMPQPPPFQAPPPPLQPPQTPQGPPPSPPPQQEEETVPQ
QPVSAPPPPPPPPPPPPPPPPPVQLVSNNSLAPTLYKYSTITRLQNQKSGNNHKPAGLFK
HGVPPSPTPPPAPVIKPVNVNHIAARTNVPPPPPPPPPPSMPTPGSAMAVLKFGPPSPAA
PPAFIQGAAFPPPPPPPPPAPTSHSVHASGLKQALKERFPSPPRDLLSPNGALEDSPPPA
PAPPPPPPPPPPPPLPGAGAPPPPPPPPPPPPPPPPPQQFPIPAQFPPPPGPPPAPPKSF
NAGFLCQTAPKPTSPVSPFPPAPPLAAMGGPTPPPPPPPPPLLAPIKRQFSLQGTHTSSH
PPPTLPKQHSLSRPAPPATSLVKQLASQFPGASPQTANHAEAPKAPISPPAVKTKPRWQP
GGIPASQEFPPPPDNNGFPAPPPPPPPPPAPVTGPTPPPPPLPPGNLSIAKSPPGFTVGG
KKPPPTPQRNSSMKDNASASYEESRRNLLSKFAPQTTSSNGSPSKDPTNGPPAPPKPGKL
NLSHLPLALQAKVSQAKQSGGDFPSPPPECAYFPPPPPASDLFPPPPPPGTDNHIGGPPR
VAVVNPQPQAPPPPPPVSLVSNSTWGKSSLKKTPPPTLGRRSNATPEPPAISPPPPTSPK
GNSGQPNFLEDLNRTLKRKSVGRQGKPDPAGTMDDMALPPPPPELLLDHEKQSNGGNGGY
MSGNISGYATLRRGPPPAPPKRGDATKLTG
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgtcggacgatgagttggatcacggggcggaggaggaggacagtgacaag
gaggaccaggacctggacaagatgttcggcgcctggctcggggagctggacaagctcacg
cagagtttggatgatgggcggccccagaaagccctgcagaagccgccgctcaggcaggag
acgaacatggccaacttctcctaccgcttctccatgtacaacataaacgaggctttgaac
caaggagactctgtggacctggacgccctgatggctgacctgtgctccatcgagcaggag
ctcagcaccatctctaagcccaactccagctcccgcagccacagcaaaggccagcagagg
gccccgggggggcgcagtgccagcaccaagcactcaggctccggtggagggggcagcagt
ggaggaagtaccagcagcagcactcgagcctcgccggccaacacagttcgaggcggcagc
ctcaacgctcgccccgccgcctccaacatctccctagacgacatcacttcccagctggag
aaggcctcgctcagcatggacgaggcggcgcgtcagacctcctcttcctcctcctcctcc
tcctcttcggtttcctctgccaccctccggcggccttcctccgaatcgtccggcggcggg
aagcaccggcgcacggggtcggtggacgcggtcagcgagaaggaggccggatcccagcgg
tccagcgtgaactcggcctccgcctccagcatggactctctggacacggacaaggcgccg
gcaggaggagaaggggaggggcagagcggcgtgggcccacagggacagaaccagaccagt
acggagcatgtcacgctgaggcgggccagcagtaaggcggccagacggcagctcgacttc
acctccgggaggggggaagtggaccgggccacccattcctatctggaccgagaaacctcg
ctcattctgaaaagcatagcaggaaagccttctcacctcctgaccaaggaggaacaagct
gccaagctgaaggcggagaagatccgagtggccctggagaaaatcaaggaggcgcaggtc
aaaaagctggtgatcagggtccacatgtcggacgagagctccaagaccatgatggtggac
gagcggcagacggtccgccaggtgctggacagcctgctggacaagtcgcactgcggctac
agcccggactggtccctggtggagaccatcacggagctccagatggagcggatcttcgag
gatcacgaaaacttggtggagaacctgctgaactggacgcgggacagccacaacaagctg
atgttcatcgagcgcatcgagaagtacgctctcttcaagaaccctcagaactatttgttg
gggcggaaggagacgtcggagatggccgatcggaataaagaagctctactggaggagtgt
ttctgcggcggctccgtgtccgtccctgaaatcgagggcgtcctgtggctcaaagacgac
ggtaaaaagtcgtggaagaagcgctacttcctcctcagagcttcggggatctactacgtc
ccaaaaggcaaagcaaaggcgtcacgagatctggtctgcttcctgcagttagaccacgtt
aacgtctattacggtcaggactaccgcagcaagtacaaagcgcccacagactactgcctc
gccctgaagcatccacagatccagaaaaagtcgcagtatatcaagtacttgtgctgcgat
gatgtaaggaccctccatcagtggatcaatggaattcgcatcgccaagtatggaaagcag
ctgtatgtcaactatcaggaagccatgaagaggacggaggctgcctacgactggtcctct
ctttccacatccagcattcgatccgcctccagttccgccagtattcctgaatcgcagtct
aatcattccggacactcggacagcggcgtggacacgggctcctctcatggccggtcccag
agcgtggtgagctccatcttttcagaggcgtggaagagaggaacccagatggaggaaagc
tccaagataaggacggaatcgtctcgcgggtccacgcactcgtcctcgcacggccaccgc
catcacagccagcactcgctggaccagccgctccacaccccccctccacaaaccccgcag
cagctcccgtcagctcaacaccagcccccccagatttggtctggtcagcagactccaccc
ccaatgatgccacaacctccacctttccaagcccctcctccgcccttacagcccccccag
acaccccaagggcctccaccgtcgcccccacctcagcaggaggaggagaccgtcccacag
cagccagtctccgcccctccgcccccaccgcctcctcctccaccccctcctccaccccca
cccccagttcagctggtgtcgaacaactcgctggcccccaccctgtacaagtacagcacc
atcacccggctgcagaaccagaagtcgggcaacaaccacaaaccggcggggctcttcaag
cacggcgtgcccccgtctcccactccacccccagcgccggttatcaaacccgtgaacgtc
aatcacatcgccgcaaggactaacgtcccaccaccgccgcctcctccgccgccgccctcc
atgcccacccccggatcggccatggcggttttaaagtttggccccccgagcccagcagcg
ccgcctgctttcatccaaggcgctgcgtttcccccgccgccccctccaccgcctcccgcc
cccacgagtcacagcgtgcacgccagcgggctgaagcaggcgctgaaggagcgcttccca
agcccgccgcgagacctgctgtccccgaacggcgccctggaggactccccgccaccggct
ccggctcctcccccaccaccacctcctcccccaccaccacccttacctggtgcaggcgct
cctcccccaccacctcctcctccaccaccgcctccccctccgcctcctcctcagcagttt
ccaatcccagcccagtttccgcctcctcctggaccccccccagctcctcccaaatccttc
aacgctggttttctctgtcagaccgcccccaagcccacgtccccggtctccccgttcccc
cctgccccacctcttgccgccatggggggacctacaccaccgccacctccaccacctccc
cctttactcgcaccaatcaagaggcagttcagcctccagggaacgcacacctccagccac
ccccccccaacgctgcccaagcagcacagtctgtccagaccggcgccgcccgccacgtct
ctggtgaagcagctggcgagccagtttcccggagcgtccccccaaaccgccaaccacgcc
gaggcccccaaagcccccatctccccccctgccgtgaagaccaaaccaagatggcagccg
ggcgggattccagcgtcccaggagttcccccctccgcccgacaacaacggattccccgca
ccgccgccgcctccacctccaccccccgcccccgtcacaggtccaacacccccgcctccc
cctctgccccctggaaacctcagcatagcaaagtcgccccctggcttcactgtgggcggc
aagaagcctccccccaccccccagaggaactccagcatgaaggacaacgcctccgcctcc
tacgaggagtccaggaggaacttactcagcaagtttgctccacagaccacctcctcaaac
gggtctccatcaaaggaccccacaaacggaccccctgcgccccccaaaccgggaaagctc
aacctgtcccacctccctctggcgctccaggctaaggtcagtcaggccaagcagtccggc
ggcgacttcccatctccaccccccgagtgtgcctacttcccgcctcctcctccggcgtcg
gacctcttccctcctcctcctcctccagggaccgacaaccacatcggggggcccccccga
gtggcggtggtgaacccccagccccaggccccccctcctccacctccagtctccctcgtc
agcaactccacttgggggaagagctccctgaagaagactccgccccctacgctggggcgg
cgcagcaacgccacgccggagcctcccgccatctcccctccgccccccacctcccccaag
ggaaactcaggccagcccaacttcctcgaagatctgaaccggacgctgaagcggaagtcg
gtgggtcggcagggcaaaccggaccccgcgggaaccatggacgacatggcgctgccgccg
ccgcctccggagctgctgctggaccacgagaagcagagcaacggaggaaacggcggctac
atgtctggaaacatctcaggctatgcaacgctgaggcgcggacccccacccgccccgccc
aagcggggggacgccaccaaactcaccgggtag
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