Oryzias melastigma (Indian medaka): 112160647
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Entry
112160647 CDS
T07439
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03320
PPAR signaling pathway
oml04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112160647 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112160647 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160647 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112160647 (nr1h3)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112160647 (nr1h3)
Nuclear receptors [BR:
oml03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
112160647 (nr1h3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
112160647
NCBI-ProteinID:
XP_024151074
Ensembl:
ENSOMEG00000005932
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All DBs
Position
LG3:complement(4109915..4127870)
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AA seq
460 aa
AA seq
DB search
MSTLSVTDIPDVGHEERKVFDGTPELQLDCMVEESSGSMSMKPDDLQSLTELSQPDDFPA
QNGPSKMSSALPVEPNDIKLDPAAGDTSVTIDGQPVKRKKGPAPKMLGNEVCSVCGDKAS
GFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGMLEQ
CVLSEEQIRLKKMKKQHDEETARTSTVVTPTPPQEAAALDPQQQEMIEKLVAMQKQCNKR
SFLDRPKVTPWPQSQDPQNRDVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQI
ALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMN
DLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLMFPRM
LMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtcggtgactgatatcccagatgttggtcatgaggagaggaaggtgttt
gatgggacgcctgagctgcagctggactgcatggttgaggagagcagtggcagcatgagc
atgaagcccgatgacctccagtcactgactgagctctcccagccggatgacttccctgct
cagaacggcccgtcaaaaatgagcagcgccctgccggtggagccaaacgatatcaagctg
gatccagctgcaggagacacttctgtcactatagatggtcagcccgtgaagaggaagaag
ggccctgctccaaagatgcttggaaacgaggtgtgcagcgtctgcggtgacaaggcctca
ggtttccactacaacgtgctgagctgcgagggctgcaagggcttctttcggcgcagcgtc
atcaaaagcgcccagtactcctgcaagaacaacggccgctgtgaaatggacatgtacatg
cgccgcaagtgccagcagtgccgcctgcgcaagtgtcgggaggccggcatgctggagcag
tgtgtgctttccgaagaacaaatccgactgaaaaagatgaaaaagcagcatgatgaggaa
acggcccgcacgtccacggtggtcacccccacgccgccacaggaggcagcagccctcgat
ccccagcaacaggagatgattgagaagctggtggccatgcagaagcagtgcaacaaacgg
tctttcctggatcggccgaaagtgacgccttggccacaaagtcaggacccccaaaaccga
gatgtgcgccaacagaggtttgcccacttcactgagctcgccatcatgtcagtccaagag
attgtggattttgcgaagcagctccctggtttcctggaactcacgagagaagatcagatc
gctctgctaaagacgtcgactatagagattatgctgctggaaacgtcgcggagatacaat
cctgcaatcgagagcattacttttctgaaggactttagttataataaggaggactttgca
aaagcaggactgcagtttgagttcataaaccctatatttgagttttcaaaaggaatgaac
gacctgcacctcgatgaggctgaatatgccctgctgattgctatcaacatcttttctgca
gaccggccaaatgtgcaggatcacgacctggtcgagagactgcagcagccgtatgtggac
gccctgcgctcttacattatgataaagagaccaaatgatcacttgatgtttccccgtatg
ctaatgaaactggtgagccttcgcacattaagtagcgttcactcggagcaggtttttgcc
cttcgccttcaggacaagaagcttccccctctgctgtctgaaatctgggacgtcaatgag
tga
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