Oryzias melastigma (Indian medaka): 112160915
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Entry
112160915 CDS
T07439
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase isoform X2
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
112160915 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112160915 (mmp2)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
112160915 (mmp2)
Peptidases and inhibitors [BR:
oml01002
]
Metallo peptidases
Family M10
112160915 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
112160915
NCBI-ProteinID:
XP_024151584
Ensembl:
ENSOMEG00000015721
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All DBs
Position
LG3:complement(26092259..26108849)
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AA seq
657 aa
AA seq
DB search
MTTPMIRSCRLIFLKVFLLLFIAFQLSYARPSPIIRFPGDDSPRTDKEVALHYLNKFYGC
PQDSCNLMVLKDTLKKMQKFFALPETGEIDAQTVAIMKKPRCGVPDVANYNFFHNKPKWQ
KKDITYRILGYSPDLDEEVINDAFYRAFKVWSDVTPLTFTRIMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGAGIGGDSHFDDDEQWTLGEGQVVKAKFGNADGEFCKFPFLFM
GTEYKSCTAQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNGDGAPCKFPFTFQGK
KYDGCTTEGRDDGYRWCATTEDYDRDTSYGFCPETAMSTVGGNAEGAPCVFPFTFLGDTY
ESCTTSGRSDGKMWCSTTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPVYTFTKDFRLPQDDIQGIQELYGVPTDKPLPPTQGPVTPMDICKESIVFDAVAQIRG
EVFFFKDRFLFRSVNFRSKPKGPMLVATYWPDLPAKIDAAYENPVEEKTVFFAGNQYWVY
RADELESGYPRRISNLGLPDDVQHIDAAFSFRRNRKTYLFSGDKFWRYDEDRKDMDPGFP
KLIADSWNGIPDDLDSAFSLNGIDYSYFFKGNHYFKLEDNSLKIVKLGEIKTDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccccgatgataagaagttgtcgtctaatatttttaaaagtgtttttgcttctc
ttcatcgccttccagctctcatatgcgcgtccttctccaataattagatttcccggagac
gacagccccaggacagacaaagaagttgctctgcactatctgaataagttctatggatgc
cctcaagacagctgcaacctcatggtgctcaaagacaccctgaagaaaatgcagaagttc
tttgctctgcctgaaactggagagattgatgctcagactgtggccatcatgaaaaagccc
cgctgtggagttccagatgttgcaaattacaacttcttccacaataaacccaaatggcag
aagaaggacatcacctacagaatcctgggatacagcccagatctggatgaagaagtcata
aatgacgctttctacagagcctttaaagtctggagcgacgtcacgcccctcactttcacc
cgcatcatggacggagaggcagacattatgatcaactttggtcgcaacgagcacggagat
ggttacccttttgatggaaaggatggcctgttggctcacgcctttgccccaggggcagga
atcgggggcgactcccactttgatgatgatgagcagtggactctgggagagggccaagtg
gtcaaggccaaatttggaaacgctgatggggagttctgcaaattcccctttctcttcatg
ggcaccgagtacaaaagctgcacggctcagggccgcgatgacggcttcctgtggtgctcc
accacgtacaactttgatgaagatggaaaatacggcttctgtccccacgagttgttgttc
accctgggaggaaatggagatggggctccgtgtaaattccccttcacctttcaagggaaa
aagtatgacggctgcaccactgagggcagagatgacggctatcgttggtgcgccacgacg
gaggactacgaccgggacacgtcctacggcttctgccctgaaactgctatgtcaaccgtg
ggaggaaatgcggaaggagccccctgtgtctttccgttcacctttctgggagacacctat
gagtcctgcactacctctgggcgcagtgatggcaagatgtggtgttccaccactaagagc
tatgatgatgacaggaagtggggtttctgtcccgatcaaggctacagcttgttcttggtg
gcagctcatgaatttggtcacgctcttggtttggagcactcccaggatcccggtgcattg
atggctccagtttacacttttaccaaagacttcagacttcctcaagacgatattcaaggc
atccaggaactttatggtgtgccaacagacaagcctttgcccccaacccaaggtccggtc
actccgatggacatctgtaaagagtcgattgtctttgatgctgttgcacaaatcagagga
gaggtctttttcttcaaagacaggttcctgttcaggtcagtcaatttccgaagcaaaccc
aaaggccctatgctcgtggccacctactggccagatctgcctgccaagatagatgctgct
tatgagaacccagtggaggaaaaaacggtctttttcgcaggaaaccagtattgggtttac
agagctgatgagctggagagtggatatcctagaagaatctccaaccttggccttcccgat
gacgtgcagcacattgacgccgctttcagcttccgaaggaacaggaagacttacctattt
tctggagacaaattctggagatatgatgaagacagaaaagacatggatcccggctttccc
aaacttattgccgattcctggaatggcatcccagatgaccttgactctgccttcagtctt
aatggcattgattacagctacttcttcaaaggaaaccactatttcaaactggaagacaac
agcctaaagattgtcaagttgggtgaaataaagacagactggctcgggtgttaa
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