Oryzias melastigma (Indian medaka): 112161115
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Entry
112161115 CDS
T07439
Symbol
acta1b
Name
(RefSeq) actin, alpha skeletal muscle A
KO
K12314
actin, alpha cardiac muscle
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04260
Cardiac muscle contraction
oml04261
Adrenergic signaling in cardiomyocytes
oml04814
Motor proteins
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112161115 (acta1b)
04820 Cytoskeleton in muscle cells
112161115 (acta1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112161115 (acta1b)
04261 Adrenergic signaling in cardiomyocytes
112161115 (acta1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112161115 (acta1b)
04147 Exosome [BR:
oml04147
]
112161115 (acta1b)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
112161115 (acta1b)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112161115 (acta1b)
Exosomal proteins of bladder cancer cells
112161115 (acta1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
112161115
NCBI-ProteinID:
XP_024151897
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All DBs
Position
LG3:complement(21649773..21651561)
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AA seq
375 aa
AA seq
DB search
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDL
AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDEAGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacattgccgcactggttgttgacaacggatctggcatgtgcaaagccgga
ttcgctggagacgatgcccctcgtgctgtctttccctccatcgttggtcgccccagacat
cagggagtcatggttggtatgggccagaaagacagctacgtaggtgatgaagcccagagc
aagaggggtatcctgaccctgaagtaccccattgagcacggtattgttaccaactgggat
gacatggagaagatctggcaccacaccttctacaacgagctgagaattgcccccgaggaa
caccccgtcctgctcactgaagcccctctgaaccccaaggccaacagggagaagatgacc
cagatcatgtttgagaccttcaacgtccccgccatgtatgtggccatccaggctgtgctg
tccctgtacgcttccggccgtaccactggtattgtgctggatgctggtgatggtgtgacc
cacaatgtcccagtctatgagggttacgccctgccccacgccatcatgcgtcttgacctg
gctggtcgcgatctgaccgactacctgatgaagatcctgactgagcgtggttactccttt
gtgaccactgctgagcgtgagatcgtgcgcgacatcaaggagaagctgtgctatgtggct
ctggacttcgagaacgagatggccaccgctgcctcctcttcctccctggagaagagctac
gagcttcccgacggtcaggtcatcaccatcggtaacgagaggttccgttgccccgagacc
ctgttccagccttccttcattggtatggagtctgctggcattcatgagactgcctacaac
agcatcatgaagtgcgacatcgacatccgtaaggatctgtacgccaacaatgtgctctcc
ggcggtaccaccatgtaccctggtattgctgaccgtatgcagaaggaaatcactgctctg
gcccccagcaccatgaagatcaagatcattgctcctcctgagaggaagtactccgtctgg
atcggtggctctatcctggcttccctgtccaccttccagcagatgtggatctccaagcag
gagtacgacgaggctggccccagcattgtccacaggaagtgcttctaa
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