Oryzias melastigma (Indian medaka): 112161189
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Entry
112161189 CDS
T07439
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112161189 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112161189 (bdnf)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Growth factors (RTK binding)
112161189 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
112161189
NCBI-ProteinID:
XP_024152004
LinkDB
All DBs
Position
LG3:complement(15264730..15278565)
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AA seq
321 aa
AA seq
DB search
MGGKMHVGQRHRSRAWTKTPCGRQLSLSFPSPPFCQNLGLFFQLLFHQVRRVMTILFLTM
VISYFSCMRAAPLRDAPGMRGHRTEGYLGAAATAVRGHGTPQSGGGPGQRGELPSLTDTF
EQVIEELLEVEGEAAQLGQGADKSQAGGGPSPVVATETKDVDLYNSRVMISNQVPLEPPL
LFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAIDMSGQTVTV
MEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSKRKI
GWRFIRIDTSCVCTLTIKRGR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaaaatgcacgttggacagaggcacaggagtcgtgcatggactaaaacgccg
tgtggacgccaactctctctctcttttcccagcccccccttttgccaaaacctgggattg
tttttccaacttttgttccaccaggttagaagagtgatgaccatcctgttccttactatg
gttatttcatacttcagttgcatgagagctgcgcccctgagagatgccccgggcatgcgg
ggccatcggacggaaggctacctgggcgccgctgcgacggccgttcgaggccacgggact
ccgcagagcggcggcgggccgggccagcgcggggaactcccctcactcacagacacattt
gagcaagtgatagaagagctgctggaggtggagggagaggcggcgcagctgggacagggg
gcggataagagccaggcaggcgggggcccgtcacctgtggtcgccacagagaccaaggat
gtcgacctgtacaattcgcgggtgatgatcagcaaccaagtgcctttggagccgccgttg
ctctttctcctggaggaatacaaaaactatttggatgccgctaacatgtccatgagggtg
cggcggcactccgatccatcgcggcggggagagctcagtgtgtgtgacagtattagccag
tgggtgacggctgtggataaaaagacggcaatagacatgtctgggcagacggttaccgtc
atggaaaaggtccctgtccccaacggccaactgaagcaatacttttatgagaccaaatgc
aaccccatggggtacacaaaggagggctgcagaggaatagacaagcggcattataactcc
caatgcaggacaacccagtcctacgtgcgagcactcaccatggatagcaaacggaagatt
ggttggcggtttataaggatagacacttcctgtgtatgcacattgaccattaaaagaggg
agatag
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