Oryzias melastigma (Indian medaka): 112161220
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Entry
112161220 CDS
T07439
Name
(RefSeq) methylthioribulose-1-phosphate dehydratase isoform X1
KO
K08964
methylthioribulose-1-phosphate dehydratase [EC:
4.2.1.109
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00270
Cysteine and methionine metabolism
oml01100
Metabolic pathways
Module
oml_M00034
Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
112161220
Enzymes [BR:
oml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.109 methylthioribulose 1-phosphate dehydratase
112161220
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Gene cluster
GFIT
Motif
Pfam:
Aldolase_II
DUF4960
Peptidase_M15_4
Motif
Other DBs
NCBI-GeneID:
112161220
NCBI-ProteinID:
XP_024152042
Ensembl:
ENSOMEG00000004323
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All DBs
Position
LG3:complement(472778..492590)
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AA seq
247 aa
AA seq
DB search
MEMSALCGTSNGCQDAGRAVSEKEEKEHPRVLIPELCRLFYQLGWVTGTGGGISLRRGDQ
IYIAPSGVQKERIQPEDMFVCDVEERDISCPPPWKNLKKSQCTPLFMNAYTMRGAQAVIH
THSKAAVMATLLYSGKEFRITHQEMIKGIRKGTSGSNYRYDDMLVVPIIENTPEEKDLKD
RMARAMEEYPDACAVLVRRHGVYVWGESWEKAKTMCECYDYLFDIAVQMKQSGLDPSALP
VEEKGIV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtcagctttgtgcggcactagcaatggctgccaagatgcaggacgagcggtc
tcagagaaagaggagaaggagcatccccgcgtactcattccagaattatgccggctcttt
tatcagctaggatgggtgacgggaacgggtggtgggatcagccttcggcgaggagaccag
atttacattgcaccatcaggtgtccagaaagagagaattcagccagaagatatgtttgtg
tgtgatgtggaagagagagacatcagctgtcctcctccctggaagaatttgaagaagagt
cagtgcacaccacttttcatgaatgcctacaccatgagaggggcacaggctgttattcac
acccactccaaggctgctgtcatggcaacacttttgtattctggcaaagagttcaggata
acgcaccaggagatgatcaaggggattcggaaaggcacctccggctctaactatcggtac
gatgacatgttagtggtgcctattattgaaaacacaccagaagaaaaggacctgaaagac
cggatggctcgagcgatggaagaatacccggatgcctgtgcagttcttgtccgacgacac
ggtgtttatgtgtggggcgagtcgtgggaaaaagccaaaacaatgtgcgagtgctacgac
tacctgtttgacatagccgttcagatgaagcagagtggattggacccgtcggcccttcca
gtggaggagaaaggaatagtctga
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