Oryzias melastigma (Indian medaka): 112161593
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Entry
112161593 CDS
T07439
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112161593 (ret)
04020 Calcium signaling pathway
112161593 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112161593 (ret)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112161593 (ret)
Protein kinases [BR:
oml01001
]
Receptor tyrosine kinases (RTK)
RET family
112161593 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
RET_CLD1
RET_CLD4
RET_CRD
Pkinase
Cadherin
RIO1
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
112161593
NCBI-ProteinID:
XP_036071306
Ensembl:
ENSOMEG00000000822
LinkDB
All DBs
Position
LG15:complement(29133106..29147793)
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AA seq
969 aa
AA seq
DB search
MGSSCGFCPGTVAALQLLLLFGGAAALYFPQKEYIETVYVGQLAGTPVLQVHAMLDSATE
RPHFFLCWNRRPYYASWFHMDVSTGVLYLNKTLEQADFSSQYQTSWPVKRLSLQVLASNS
FIKGSQCLAKRKALITLDFVNATMPPCAQTDLKELCFPHTSNPHIMENRFPGALRQFRRL
TRIGVCPNLTVSYSVESDSPAPFAVSENSTELLVTAPLDREESELYRLVMVCTVRTETLI
TKLETPLDVFVDDEDDNAPYLNGTDTADVVISFNRTKGGTFGSLRVFDRDLTTIFPKDKS
HNRYVETLLSNDPWIKETFDIKSSFSERKTTPAGIRESVHEYHLVLKRNLHVTENRSVYI
DYLVNDTTYPGLEGTVLLHFNVTILPVQINFANTTQEFTVSRKASVYTQVGRICVENCLE
FSGFRVTYWLEVLDKNTSTSSLSCYAAISITQAPDGMWGLLYVNDSEPLHRPECQELHYV
VMAQEEFKELETSTQIQVLLEGEGEAGCSNTSASVFFFFLKFFFHCFLYSAEKEGQDNQQ
LLSCAEKRQRRDCESFRGLGATTGRCQWRQGAGKGISDHYSTCSPDLRTCPDSFCDAVES
KDVSICPQDCTTQPVTGGHERGLSGNGVRAGHGTCYCYTDKCFCEKEDVEDVICDDMCKT
IIATALLLSFIVSILLSSYFLHRYHKNSPKPPIASAEMTFRRTPQSYPISFPANNVRRGS
QESIETDTFKIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKML
KENASHSELRDLLSEFTLLKQVNHPHVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESR
KVGPSFMGRDANRNSSYLENPDDRALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV
LVAEGRKMKISDFGLSRDVYEEDSYVKRSKVRKSHGWVWFDGVMVKALTRSVHRSGSHSR
EVDGHRVLV
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaagctgtggtttctgtccgggaaccgtcgctgcgctgcagctgctgctgctg
tttggaggagcggcagcgctgtacttccctcagaaagaatacattgagacggtttatgtg
ggccagctagcggggacgccggtccttcaggtgcacgccatgctggacagcgccaccgag
aggccacatttcttcttgtgctggaacagacgaccatactatgcctcctggttccacatg
gacgtcagtactggagttctttacttgaacaaaactctggagcaggcggacttcagctca
caatatcaaacttcatggccggtgaagcggttgtccctccaagttttggcttctaacagc
ttcatcaaggggtcccagtgtttggccaaaagaaaagccctcatcaccctggactttgtc
aacgccaccatgcctccctgtgctcagacagacctgaaggagctctgcttcccgcacacc
tccaaccctcacatcatggagaaccgcttccctggagctctacgtcagttccgccggctc
acgaggatcggcgtgtgtccaaacctcaccgtctcctacagtgtggaatcagactctcca
gcgccgtttgctgtcagcgagaactccacggagctgttggtgaccgccccgctggaccgc
gaggagagcgagctctacagactggtgatggtctgcacggtccggacagaaaccctcatc
accaagctggagacacccctggatgtttttgtggacgatgaggatgacaacgctccatac
ctgaacggaaccgacacggcagatgtggtcatcagcttcaaccgtaccaaggggggaact
tttggctctttacgggtctttgacagggatttaaccaccatctttcccaaagacaagagt
cacaaccggtatgtagagactctgctgagcaatgacccctggataaaggaaacttttgac
ataaaaagctccttcagtgaaagaaaaaccactcctgctggcattcgagagtccgtccac
gaatatcatctggttctgaagaggaacctgcatgttacagagaaccggagcgtctatata
gactaccttgtcaacgacaccacctatccaggtctggagggaacagttctgctgcacttc
aacgtcaccatattaccggtccaaatcaacttcgccaacacgactcaggagttcacggtg
tcacgcaaagcttctgtttacacgcaggttggcaggatctgtgtggaaaactgcctggag
ttcagcggcttcagagtcacgtactggctggaggttctggataagaacacgtccacatcc
tcgctgtcctgctacgccgccatcagcatcacgcaggcgccggatgggatgtgggggctg
ctgtacgtgaacgactctgagcctctgcacaggcctgagtgtcaggagctgcactatgtt
gttatggctcaggaagaattcaaagagctggagaccagcacccagatacaagttctgctg
gaaggagaaggtgaggcgggttgttcaaacacatctgcatctgtttttttttttttttta
aagttcttcttccattgtttcttgtattcagcggaaaaggagggccaggacaaccaacag
ctcctttcctgcgctgaaaagagacagcgcagggactgtgagtctttcagaggcctcgga
gcaacaacagggagatgccagtggaggcaaggtgccgggaaaggaatatctgaccattac
tccacctgctctccggatctgcggacttgtccagacagcttctgcgatgcagtggagagc
aaagacgtgtccatttgcccccaagattgcaccacccaacctgtgaccgggggccatgag
cgaggcttgagcggaaacggcgttcgggccggccatggaacctgctactgctacaccgac
aaatgcttctgcgagaaggaagacgtcgaggacgtgatatgtgacgacatgtgtaagacc
atcatcgccaccgctctgctgctgtccttcattgtgtccatcctcctgtcctcatacttc
ctccaccgctaccacaagaactcgcccaaacccccgatagcgtctgcagagatgactttc
cgccgcacgcctcaatcttatcccatcagcttccctgctaacaacgtacgccgaggctct
caggagtccatcgagaccgacactttcaaaatacctgaggatccaaagtgggagtttccc
cgcaaaaacctggtgcttggcaagactttaggggaaggagagtttgggaaagtcgtaaag
gcaacagcctttaggctgaaagggaaggccggctacaccactgtggctgtaaaaatgctt
aaagagaacgcttcccacagcgagctgagagaccttctgtcagaattcactctgctgaag
caggtcaaccacccacacgtcataaagatgtacggtgcgtgcagccaagacggtccattg
tatctcatcgtcgagtacgccaagtacggatctcttcgtaatttcctgcgcgagagcagg
aaagttggcccgagcttcatgggcagagatgcgaaccgaaactccagctacctggagaac
ccggatgaccgggccctcaccatgggagacctgatctcttttgcatggcagatttccaga
gggatgcagtatctggcagaaatgaagcttgtgcacagagacctcgcagcacgaaacgtc
ctggtggctgaaggacggaagatgaagatctctgactttggtctgtccagagatgtttat
gaggaggactcgtacgtcaagaggagcaaggtgaggaaatcccatggatgggtttggttt
gatggtgtgatggtaaaagctctaaccaggtctgtgcatcgatcagggtcgcattcccgt
gaagtggatggccatagagtccttgtttga
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