Oryzias melastigma (Indian medaka): 112161658
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Entry
112161658 CDS
T07439
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04060
Cytokine-cytokine receptor interaction
oml04150
mTOR signaling pathway
oml04210
Apoptosis
oml04217
Necroptosis
oml04350
TGF-beta signaling pathway
oml04620
Toll-like receptor signaling pathway
oml04621
NOD-like receptor signaling pathway
oml04622
RIG-I-like receptor signaling pathway
oml04625
C-type lectin receptor signaling pathway
oml04920
Adipocytokine signaling pathway
oml05132
Salmonella infection
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112161658 (tnfa)
04350 TGF-beta signaling pathway
112161658 (tnfa)
04150 mTOR signaling pathway
112161658 (tnfa)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112161658 (tnfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112161658 (tnfa)
04217 Necroptosis
112161658 (tnfa)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112161658 (tnfa)
04621 NOD-like receptor signaling pathway
112161658 (tnfa)
04622 RIG-I-like receptor signaling pathway
112161658 (tnfa)
04625 C-type lectin receptor signaling pathway
112161658 (tnfa)
09152 Endocrine system
04920 Adipocytokine signaling pathway
112161658 (tnfa)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112161658 (tnfa)
09171 Infectious disease: bacterial
05132 Salmonella infection
112161658 (tnfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112161658 (tnfa)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112161658 (tnfa)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Tumor necrosis fators
112161658 (tnfa)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Cytokines
112161658 (tnfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF4148
Motif
Other DBs
NCBI-GeneID:
112161658
NCBI-ProteinID:
XP_024152758
Ensembl:
ENSOMEG00000008018
UniProt:
A0A3B3BP94
LinkDB
All DBs
Position
LG13:28912058..28918682
Genome browser
AA seq
236 aa
AA seq
DB search
MEVECKVPMNVSDNTEADQPTTMRGKPSSKLTAAMLAVILCLATAAAALLFFNSHAKHPE
VHEDSFHLKLRQIANVRAAIHLGGEFNASLKDSIQWMAEVDQYHSQGGLKLDNNEIVIPR
NGLYFVYSQASFAVSCSGDSTANSMVHLSHTVQRWSSSYGTTDNKVYRNILHSVRTACQR
AESSEQDGSGHWYSAVYMGAVFNLRRGDRLRTVMDKNMLEQLEDDPGKTFFGVFAL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaatgcaaggtcccaatgaacgtcagtgacaacacagaagcggatcaaccg
acgactatgagagggaagccaagctccaagttgacagcggcgatgctggctgtcattctt
tgcctcgccacagccgctgccgcactactcttcttcaactcacatgctaagcatccagaa
gtacatgaagactcattccatctcaaactcaggcagattgccaacgtgagagcggccatt
catctgggaggggaattcaacgcctccctcaaagactccattcagtggatggccgaggtg
gaccagtaccactcccaggggggtctgaagctggacaacaatgagattgtgattcctcgc
aatggcctctacttcgtttacagccaagcgtccttcgcggtcagctgcagcggcgattcg
accgccaactccatggtccacctcagccacaccgtgcagcgctggtccagctcgtacggg
acgacggacaacaaggtgtaccggaacattctgcactcggtacgcacggcgtgccagagg
gcagaaagcagtgagcaggacggcagcggacattggtactccgctgtgtacatgggagct
gtgttcaacctgagaagaggggacaggctgaggacggtgatggataagaacatgctggag
cagctggaagacgatccggggaaaaccttcttcggtgtgtttgctttgtaa
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integrated database retrieval system
