Oryzias melastigma (Indian medaka): 112162037
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Entry
112162037 CDS
T07439
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04060
Cytokine-cytokine receptor interaction
oml04672
Intestinal immune network for IgA production
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112162037 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112162037 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112162037 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112162037 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112162037 (cxcl12a)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Chemokines
112162037 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Chemokines
112162037 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
B12D
Motif
Other DBs
NCBI-GeneID:
112162037
NCBI-ProteinID:
XP_024153435
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All DBs
Position
LG15:complement(23190516..23195220)
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AA seq
98 aa
AA seq
DB search
MDVKLFALAAALAMVIYAPQTHAKPISLVERCSCRSTVNNIPKGYIRELKFIHTPNCPFQ
VIAKLKTNKEVCVNPEVRWLKQYLKNALNKMKKAKQTI
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagctctttgcgctcgcggctgctctcgcgatggtgatatatgcgcctcag
actcatgcaaagcccatcagtctggttgaacgatgcagttgtcgttcaaccgtcaacaac
atccccaaaggttacatccgagagctcaagttcattcacacacccaactgccccttccaa
gtgattgctaaactgaagacaaacaaggaggtgtgcgtgaatccggaggtgcggtggctt
aagcagtacctgaagaatgctctcaacaagatgaagaaagccaaacagaccatctga
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