Oryzias melastigma (Indian medaka): 112162091
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Entry
112162091 CDS
T07439
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112162091
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
112162091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
112162091
NCBI-ProteinID:
XP_024153511
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All DBs
Position
LG15:22819582..22824252
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AA seq
922 aa
AA seq
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MSRFVLEEVSSFKDFTGSEALADMLSLSNSEHNGLSNVRVSPDSRHIHIILQKPEVGLVT
FDKFERPLPVQNQKKLDLWLTRTAPIVDVVYLDHKNSSRIRGAAVAAVVYENGKAEFWRF
QDCKVGWHLLQTSDLCNSPQAKVVSVCASSHLLIWCEERPPSESSSASPPLRNNLRFCVC
RRDYEVEEGAVILGGVKITLHSSPKFAVLCSGECVHLLPDVEAKTQSSISKFLFTWSPHR
DTFTVNTTCNNTPVKLVSARESDFKRLVTDCVGYLSILEPPEIQSFAPTGCGGLLLLLST
GWICLLQKDGILRRVYKLAENCFIQHRGPTSLCIFKDTLALIIEEKLYLIDLNCGRELEK
IVLKKTGLLYVNQDVRQTPHLLSESGLFMAVNKETECKDCSSKRKLSGSSAVNRAHSGAL
LVEAVFEEACKYYQQRSLSSTQLTVEALKKGGRFQAPISLASILRNYLSSTSVKRSGAEL
SQNGWGECVAGQDKLMCSLESELRALVSLEEVKGCLVKGGAKEVESMCYTLVEKEVARLL
SISDLDKDSLSYLNSVFSIFPCQAWKAVQVALQLHYNGEGSLSSKAPPDMWKCVLSPALH
SGSTSSLLLSNGQSKHSLRGDQNCKARAGASSSPAVLPVFELLCQSVLHFQPSWLPKFLQ
LAQQQQGSAGLGLPLASSSWSFSGGRGREAGENHVPLYKRALCILSSSSPDRNQHQDIEV
ELLLVSGRPNAVLQALRILMGKQQWEKVMQVAQEFCKQGPLLNKEIFTTLLCEVAHHRDL
DSYLDLLWALCPEDFTVTTILNLVLQNLPSPNSPAIPSSFYTSCPPSSPPFVDSGSSQLT
IGLLKPLLRKVLQRETKPSQRYADILQSPSYPPPALPRHPTDQSRDPSVPTTPPAETHAA
ESTHTDLQRSRGALPANPVGSA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggttcgtgttggaggaagtgtcatctttcaaggacttcactggcagtgaggct
ctggcagacatgctgagtctgtccaacagcgagcataacggtctgtcaaacgtccgcgtg
agccccgattcacgtcacatccacatcatcctccaaaaacctgaggtcggtcttgtgact
tttgacaagttcgaaagacccctgcctgtccagaaccagaagaaactggatctgtggctg
acccggaccgcccccatagtggatgttgtttatctggatcacaaaaacagcagcaggatc
agaggcgcagctgtggctgctgtggtttatgagaacgggaaagccgagttttggaggttc
caggactgcaaggttggatggcatctcctccagacatccgatctgtgcaacagcccccaa
gccaaagtggtgtctgtctgtgcctcctcccatctcctcatctggtgtgaggagaggcca
ccttctgaaagctcctccgcatccccgccgctgaggaataacctgcgcttctgtgtgtgc
agacgggactatgaggtggaggagggcgccgtcatcttgggcggagtgaaaatcaccctc
cacagcagtcctaagtttgctgtactttgctctggcgagtgtgtgcatcttcttcctgac
gtggaggcgaaaacgcagtcgagcatctctaaattcttgtttacctggtcgcctcaccgt
gacacttttacggtgaacaccacgtgcaataacacccccgttaaactggtttcagccaga
gagtcggactttaaaaggctggtgactgattgtgtggggtatttatcaattctggagcca
ccggagattcagagcttcgcccccacaggctgtggaggcctgctcctgctgctcagcaca
ggctggatctgcctcctgcagaaagacgggattctgcgccgggtctacaaactcgccgag
aactgcttcatccaacaccgaggtcccaccagcctgtgcatattcaaggacactctggca
cttataatagaagaaaaactctacctgatagacctaaactgtggcagagagttggaaaag
attgtgttgaaaaaaacagggttgttatacgtaaaccaggacgtcagacaaaccccacat
ttgctgtcagaaagtggcctgttcatggcagtaaacaaggaaacggagtgtaaagactgc
agctcaaagaggaagctctccggttccagtgcggtgaatcgagctcactctggagccctc
ctggtggaggctgtgtttgaggaagcctgcaaatactaccagcagaggagcctgagcagc
acccagctcaccgtggaggcgctgaagaaagggggccggttccaggctcccatttcttta
gcctccatcctcaggaactatctcagcagcacaagtgttaagaggagcggcgcagagctg
tcacagaacggatggggggagtgtgtcgccgggcaggacaaactgatgtgctccctggaa
agtgagctcagggctttggtgtccctagaggaggtgaaaggctgtttagtgaagggaggc
gctaaagaggtggagagtatgtgctacactctggtggagaaagaggtagcgagacttctg
tcaatctccgacttggataaagattctctgagctacctgaactccgtcttcagcatcttc
ccctgtcaggcctggaaggctgtacaggttgcactacagctgcactacaacggcgaagga
tctctgtccagcaaagctcctcctgacatgtggaagtgcgtcctcagtcctgctctgcac
tccggctccacatcctccctcctgctctctaacggccagtcgaagcacagcctgagagga
gaccaaaactgcaaagccagagcgggagcgtcctcctccccagctgtcctcccagtgttt
gagctcctctgtcagtcagttttacatttccaacccagctggctgcccaaattcctccag
ctggcccagcagcagcagggctcggcaggactgggtttgcctctggcttcctcctcctgg
agcttctctggaggaagaggaagggaggctggggagaaccacgtacctctctacaaacgg
gcgctttgtatcttgtccagctccagcccagacagaaaccagcaccaggatatagaggtg
gagctgctgctggtcagtgggcgccccaacgcggtcctccaggcactgaggatcctcatg
ggcaagcagcagtgggagaaggtcatgcaggtggcccaggagttctgcaaacagggcccg
ctcctcaacaaggagattttcactactttgctctgtgaggtggctcaccacagagatctg
gattcctacctggacctgctgtgggctttgtgccccgaggacttcacagtcaccacaatc
ctcaacctggtcctccaaaacctcccgtctcctaactctcccgccatcccttcttcattc
tacacatcctgtcctccgtcttctcctccgttcgtggactccggcagcagccagctgacc
atcgggctgctgaagcctctgttgaggaaagtgcttcagagggaaaccaagcccagccag
cgctacgccgacatcctgcagtcaccgtcgtacccccctcccgctcttcctcgccacccc
acggatcagtctagggatcccagcgtccccacgacccctcctgcagaaacacatgcagca
gagtccacgcacacggacctccaaagaagcaggggggcacttccggctaaccctgtcgga
tctgcataa
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