Oryzias melastigma (Indian medaka): 112162326
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Entry
112162326 CDS
T07439
Symbol
egr2b
Name
(RefSeq) early growth response protein 2b
KO
K12496
early growth response protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112162326 (egr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112162326 (egr2b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
112162326 (egr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3446
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-BED
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf-C2H2_ZNF462_1st
DUF7565
zf-C2HC_2
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
112162326
NCBI-ProteinID:
XP_024153885
Ensembl:
ENSOMEG00000014974
LinkDB
All DBs
Position
LG19:20459934..20462221
Genome browser
AA seq
446 aa
AA seq
DB search
MTAKTLEKVNPVNLGGFVHPTGDSVYSVDDIASSLPTSVAIFPNADLGAHYDQINAAADS
LMDMCAEKRSMDLSYSSGFSQPPSHRNQTFTYMGKFSIDSPYPANWSPDGVINIVSGIFN
MTQPPPPPPPPSSSTSSSPASSGSPHHFSSGNLSCTMAAQSQAEIDHPHHPYSPPPPYPS
SSCPEVYHQDPSAFLSTSTCPISSYPSTPYPSPKQPGSSDAPGLFPIIPDYTGFFQPTCQ
RDMHAAGIQDRKPFVPCPLDTFRVPPPLTPLNTIRNFTLGGPGAGGSDAGQQRLPSAYSP
QNLPLRPILRPRKYPNRPSKTPIHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQC
RICMRNFSRSDHLTTHIRTHTGEKPFACDFCGRKFARSDERKRHTKIHLRQKERKSSAVS
SSSSSSSSSALERSSGVISATSGICS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaaaactctggagaaagtgaatccagtgaatctcggggggttcgtgcacccg
acgggagacagcgtctactccgtggatgacatcgccagcagcctgccgacctctgtggcc
atcttccccaacgcagacctgggagcgcactacgaccagatcaatgctgcagcagacagt
ctgatggacatgtgcgcggagaagcgctccatggacctctcgtactccagcggcttctcc
cagcccccctcccaccggaaccagaccttcacctacatgggaaagttctccatcgactcc
ccttatccagccaactggagtcccgacggagtgatcaacatcgtttcgggcatcttcaac
atgacccagccacctcctcctcctcctcccccctcatcctccacatcctcctctccggct
tcatcaggatctccgcatcacttctccagcggaaatttgagttgcaccatggcggctcag
agtcaggcagaaatagatcacccccaccacccgtactcacccccgcctccgtacccgtcc
tccagctgtccggaggtgtaccaccaggacccctctgcgttcctgtccacctccacctgc
ccgatcagctcctacccctccaccccgtacccctcccccaagcagcccggcagctcggac
gccccggggctgttccccatcatccccgactacacgggcttcttccagccgacgtgtcag
cgggacatgcacgcggctggcatccaggaccggaaaccgttcgtcccgtgcccgctcgac
actttccgcgtgccccctcctctcaccccgctcaacactatcaggaactttacgctcgga
ggtccgggtgcgggcggctcagacgcggggcagcagaggcttccttctgcctacagtcct
cagaacctgcccctgaggcccatcctgcgacccaggaaatacccgaaccgacccagcaaa
acccccatccacgagcggccgtacccctgtccggcggagggctgcgaccgccgcttctcc
cgctccgacgaactgaccagacacatccgcatccacactggacacaagcccttccagtgc
cggatctgcatgcgcaacttcagccggagcgaccacctcaccacgcacatccgcacgcac
acgggggagaagccgttcgcctgcgacttctgcggccggaagttcgctcggagcgacgag
agaaagagacacactaagatccacctgcggcagaaggagaggaagtcctccgcggtgtcc
tcctcctcctcctcctcctcatcctccgcgctggagcgctcctcgggcgtcatcagcgcc
accagcgggatctgttcctag
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