Oryzias melastigma (Indian medaka): 112162334
Help
Entry
112162334 CDS
T07439
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00514
Other types of O-glycan biosynthesis
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112162334 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112162334 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112162334 (rfng)
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
112162334 (rfng)
Glycosyltransferases [BR:
oml01003
]
Glycan extension
O-Glycan
112162334 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
112162334
NCBI-ProteinID:
XP_024153900
Ensembl:
ENSOMEG00000014457
UniProt:
A0A3B3C5Y8
LinkDB
All DBs
Position
LG19:20074424..20087918
Genome browser
AA seq
375 aa
AA seq
DB search
MHIASVGVSKFCFLLSVALCCLLLLLIPALQPPARQVDPPQPRPRVRPRPAGVSAGAGKG
APPSKLSGGSEDVLIRTKLPKNRNDSPKTGLGPFSRSRPLDKLELKDIFIAVKTTRKYHK
SRLELLIHTWVSRAKEQTFIFTDGEDKDLQQRTGVNLINTNCSAAHTRQALCCKMSVEYD
KFIESQRKWFCHVDDDNYVILPSLLRLLSSYHHSQDIYLGRPSLDHTIEAAERVKSDGSV
SVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEKIRLPDDCTIGYIIEALLEVRLT
HTHLFHSHLENLQKLPVDTALDQVTLSYGGFENRRNVVSIGGFSLSEDPTRFLSVHCLVY
PETDWCPKPKAGDRK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcacatagcatctgtgggggtcagcaagttctgcttcctgctgtcggtggcgctctgc
tgtctcctcctcctgctcatcccggctctccagccgcccgctcgccaggtggacccgcct
cagcctcgaccccgggtcagaccccgccctgctggggtctcagcaggtgctggaaaagga
gctccgccctcaaagctcagtggaggttcagaggatgtactcatcaggaccaaactcccc
aagaacagaaatgacagtccaaagacgggtctgggtcctttttccagatccaggccgctg
gataagttggagctgaaggacattttcattgcagtaaagaccactaggaagtaccacaag
tccagactggagctgctcatccacacctgggtgtcgcgagcgaaggagcagaccttcatc
ttcactgatggggaggacaaagacctgcagcagaggacaggagtgaacctcatcaacacc
aactgctcagccgctcacacccgccaggctctgtgctgcaagatgtcagtggaatacgac
aagttcatcgagtcccagaggaagtggttctgccatgtggacgatgacaactacgtgatc
ctgcccagcctgctgcgcctgctgtcctcctaccaccacagccaggacatctacctgggg
cggcccagcctggatcataccatcgaggctgcagagagggtgaagagtgacggatcggtt
tccgtcaagttctggtttgccacaggaggggcggggttctgcatcagccgagggttggcc
ctgaaaatgagcccgtgggccagtctggggaatttcatcagcacggcagagaagatccga
cttccagatgactgcaccattggttacatcatagaggctctgctggaggtccgcctgacg
cacacgcacctcttccattctcacctggagaacctgcagaagctacctgttgacaccgcg
ctggatcaggtgactctgagttatggaggctttgagaacagaagaaacgtggtcagcatc
ggaggcttctcgctgtctgaggacccaacaaggttcctgtcggtccactgcctcgtgtac
ccagagaccgactggtgtccaaagcccaaagctggagacaggaagtga
DBGET
integrated database retrieval system
