Oryzias melastigma (Indian medaka): 112162858
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Entry
112162858 CDS
T07439
Symbol
tjp2a
Name
(RefSeq) tight junction protein ZO-2a isoform X1
KO
K06098
tight junction protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112162858 (tjp2a)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
DUF6288
Motif
Other DBs
NCBI-GeneID:
112162858
NCBI-ProteinID:
XP_024154551
Ensembl:
ENSOMEG00000017457
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All DBs
Position
LG12:22385250..22434944
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AA seq
1286 aa
AA seq
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MKFKKFITIMQAAMGIVPLNKRELLPPGRKLWRPSGDQACSDPTSTDLLKSSRRFCWSRE
AQYLYLRRLSSRSLSAITMNPVMEETVWEQFTVTLQKDSKMGFGIAVSGGRDNPNDETGE
TSIVVSDVLQGGPADGLLFEKDRVIQVNGVPMEGVVHSFAVQTLRKCGKVAKIVVKRPVK
VPVTAMNRAPSPDDRVFNNDYNDDYNYEPDRRSTHSSARDHSQERGGYMDSGYQTRERDY
NRQDRGRNPERDLSPDRRPRRDGSRGRTLDRSPDRRYSPDRRYSPDRRSSPDRRYSPDRR
YRSEHMLDRDHSPDRRYRSERALDRDYSPDRRYRSERMLDRDYSPDRRYRRESPGPVRGR
DPSFERNPRKFDEPVRRSASRDRLDRSPSPVVPPIPIPLPRPARDLEPLEKPVNVLLLKN
HPNEEYGLRLGSQLFIKEMTSTGLAGRDGNLKEGDIILKINGTVTENLSLADAGKLIEKS
RGKLQLVVQRDRRQVLIRIPPMVDSDSELDDISEIESYRSYSPQDDRRGHHSDLSSHSSN
ERLRDKPREDPPSRLAKMGAMPTPFRGSEKAAEDTPSVKAEREEPRSATPPSPAVPSRVH
APPKVLLKPSAEDLEVYGPNTVMVLFKKGDSVGLRLAGGNDVGIFVAGVQEDSPADQEGL
RTGDQIMKVNNMDFRGMVREDAVLYLLEIPKGEDVTILAQSKPEVYKDILASGRGDSFFI
RTHFEYEKETPQSLPFSRGEIFKVTDTLYDGKLGHWLAVRTDKNNQLMEKGIIPNKSRAE
QMANVQNSAPASSANDRGDFWRLRGQRAAKKKDLRKSREDLSATPVTTRFPAYERVVLRE
AGFRRPVVIFGPISDAVNEKLAAELPDEFVIAKTEPKDAGSEKSSGVVRLNTIRQIIEQD
RHALLDVTPKAVDTLNYTQWYPIVIFLNPDSKQGVKTMRNRLLPGSSRSSRKLYEQAVRL
RKTCSHLFTATIDLISANDAWYGSVKDEIKLQQERAVWVSEGKLDGSDEELDLHDDHLSY
LSAMGADYLSMDSRLTSDYDDTADEGGAYTDNELDETMDDPHPVSAISRSSEPVLRDEKS
HPEARGRIRSTSNRDTLNREPSPPPSFVPEPPKVRTQIRSDSTRSESQSSSTISSDAVVG
NKPLPPPIALKPSIARVPTEDQSPVKEEEDPANKSFLGKRMGEQIKAFEKMDHLARAQRV
LELQEAESARLEIAQKHPDIYAVPVKLPKHNLNRPQPIGSNAEPQTPSRPLYSERPEDAE
GDYRRQPSEHTKRGFYAPQKYKDTEL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagaagtttatcaccatcatgcaagcagccatggggatcgtacccctgaac
aaacgcgagctcctgccgcccggcaggaaactgtggagaccctcgggagaccaggcgtgt
tctgaccccaccagcactgacctgctcaagtccagtcgcagattctgctggtccagagaa
gcacagtacttgtatctgcgccgcctgtcttcacggagcctctcagctatcacaatgaac
ccggtgatggaggagacggtgtgggagcagttcactgtgacgctgcaaaaagattccaaa
atgggcttcggcattgcagtgtccggaggacgggacaacccgaacgatgagacgggcgag
acgtccatcgtggtgtctgatgtcctgcagggcgggccggctgatgggttgttgtttgag
aaggaccgcgtgattcaggtgaatggcgtccccatggaaggggtggtccactcctttgct
gtgcagaccctcaggaagtgcggcaaagtcgccaaaatagttgtcaagaggcccgtgaag
gttcctgttactgcaatgaaccgcgccccctcccccgatgaccgtgtcttcaacaacgac
tacaatgatgactacaactacgagcccgaccggcgcagcacacacagcagtgcgcgggac
cacagtcaggagcggggaggctacatggattcaggctaccaaacccgtgagcgggactac
aaccggcaggaccgcggcaggaacccagagagagacctgagtccagaccgccggccccgc
agggatggcagcagaggtcgcactttggaccgcagccccgacagacgctacagccctgac
cggcgctacagccctgatcgccgcagcagccctgaccggcgctacagccccgatcgccgc
tacaggagtgagcacatgctggaccgcgaccacagcccagaccgccgctaccgcagtgag
cgcgcactcgaccgggattatagcccggaccgccgctaccgcagtgagcgcatgctggac
cgggattacagcccggatcgccgctacaggagagaaagcccaggaccggtccgcgggcgc
gacccaagcttcgagcgcaaccccaggaagtttgatgagccagtgagacgaagcgccagc
agggaccgtctggaccgctctccatcacccgtggttccacccatccccatcccactgcca
cgccccgcccgtgacctggagccgctggagaaacctgtgaacgtgctcctgctgaagaac
caccctaacgaagagtatggccttcgtctgggcagccagctcttcatcaaagagatgacc
agcacaggactcgccggcagagacgggaacctgaaggagggcgacatcatactgaagatt
aacgggacggtgacagaaaacctgtctctggccgacgccgggaagctgatcgagaagtcc
cgcgggaagctgcagctggtggtgcagcgggaccggcgtcaagtgctgatccgaatccca
cccatggtcgacagcgactcggagctcgatgatatctcagagatcgagtcgtaccgctct
tactctccacaggatgacagacgaggccaccactccgacctctcctcccactcttccaat
gagaggcttagagacaaacccagagaggacccccccagcagactcgccaagatgggggct
atgccaacaccgtttagaggttcagagaaggctgctgaggacacgccctctgtgaaggca
gagagggaggagcctcgatcggcaacgccaccaagtccagctgtgccctccagggtccac
gcccctcccaaggtgctgctgaagccgagcgcagaggacctggaagtttacggacccaac
accgtgatggtgctcttcaagaaaggagacagcgttggccttaggctggcgggggggaac
gatgtgggcatctttgtagctggtgttcaggaggacagcccggcggaccaggagggtcta
cgcactggagatcagatcatgaaggtgaacaacatggacttcagaggaatggtgcgtgaa
gacgccgttctctacctcctggagattcccaaaggagaggatgtaaccatcctcgctcag
agcaagcctgaagtctacaaggacatcttagcctctggccgaggagactccttcttcatc
cgaacccacttcgagtatgagaaggaaactcctcagagcctcccgttctccagaggagag
atcttcaaagtgacggacacgctctacgacggcaagctgggtcactggctcgcagtccga
acggacaaaaacaaccagctgatggagaaagggatcatccctaacaagagcagagccgag
cagatggcaaacgtccagaacagcgctccggcatcgtccgccaacgaccgcggggacttc
tggaggctgaggggtcagagagccgccaagaagaaggacctgcgcaagagccgggaggac
ctgagcgccacgccggtcaccaccaggttccccgcctacgagagagtggtgttacgtgaa
gccggtttcaggagacctgtggtcatttttggacccatttctgacgcagtgaatgaaaag
ctggctgcagaacttcccgacgagtttgttattgccaaaacggagcccaaagatgccggc
agtgagaaatcctctggagttgtgcgcctaaacaccattcgacagatcattgaacaggac
cgacacgctctgctggacgtgacgccaaaagccgtggacaccctgaactacacacagtgg
tatcccatcgtcatcttcctgaaccccgacagcaagcagggcgtgaagaccatgaggaac
cgcctcctgcccggatccagccgaagctccaggaaactgtatgagcaggccgtccggctg
aggaagacctgctcacacctgttcacagcaactatcgacctgatctcggccaacgacgcg
tggtacggcagcgtgaaggacgagattaaactgcagcaggagagagctgtgtgggtgtcg
gagggcaagctggacggttcagacgaggaactggatctccacgacgaccatttgtcctac
ctgtctgccatgggcgcagactacctcagcatggacagccggttgaccagtgactacgat
gacaccgccgatgaaggcggagcttacactgacaacgagctggacgagacgatggatgac
ccgcaccccgtgtcggccatcagtcgctcctcggagcccgtcctgcgagacgagaagtct
catcctgaagcccgaggccgcataaggagtacgagcaacagagacacgctgaaccgagag
cccagcccacccccctcgtttgtcccagaacccccaaaggtacgcacgcagatccgcagc
gactccacccgcagcgagtctcagtccagcagcaccatcagcagcgacgccgtggtcggg
aacaagcccctccccccacccatagccctgaagccctccatcgcccgcgtgccgacagag
gatcagagcccggtcaaagaggaggaggaccccgccaacaaatccttcttgggcaagaga
atgggtgagcagattaaagcctttgagaagatggaccacctggcccgagctcagagggtg
ctggagctacaggaggccgagagtgctcggttggaaatcgcccagaagcatcccgacatc
tacgccgtcccggtgaaactccccaaacacaacctcaaccgtccccagccgatcgggtcc
aacgccgagccgcagacgccatcccggccgctgtactccgaaagacccgaggacgctgag
ggcgactaccgccgccagccttctgagcacaccaagagagggttctacgccccccagaag
tacaaagacaccgagctgtga
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