Oryzias melastigma (Indian medaka): 112163043
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Entry
112163043 CDS
T07439
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00280
Valine, leucine and isoleucine degradation
oml00650
Butanoate metabolism
oml00900
Terpenoid backbone biosynthesis
oml01100
Metabolic pathways
oml03320
PPAR signaling pathway
Module
oml_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112163043 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112163043 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112163043 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112163043 (hmgcs1)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
112163043 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
112163043
NCBI-ProteinID:
XP_024154916
Ensembl:
ENSOMEG00000018257
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All DBs
Position
LG12:21813066..21830716
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AA seq
515 aa
AA seq
DB search
MLMPGSAQISYMGPWPKDVGIIALELYFPSEFVDQAELEQYDGVAAGKYTVGLGQARMGF
CSDREDINSLCLTVVQRLMERNGLSYDSIGRLEVGTETIIDKSKSVKTVIMQLFEDCGNT
DVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAVA
MLVGPNAPLAFERGLRGTHMQHAYDFYKPDLMSEYPVVDGKLSIECYLSALDRCYSVYRN
KIHTQWQREGSDKRFSLEDFGFLVFHSPYCKLVQKSVARLMLNDFLNHPNPNTETGPFTG
LDAFRDVKPEETYFDRDVEKAFMKASADLFERKTKTSLLVSNQNGNMYTPSVYGCLASVI
AEHSPSQLAGQRIGVFSYGSGFAASLYSLRVTQDHTPGSALDKLVSSLSDLGVRLDSRKK
VAPAVFSDSMKLREDTHHLASYVPRGSVEDLFPGTWYLTRVDEKHRREYSRRPLDDDLPA
EPELVCLGAAAQHIPSPVKKMPRIPATTTAHEASS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcctggttcagcccagattagctacatgggaccgtggcccaaagatgtgggt
atcattgccttggagctgtacttcccttccgagtttgtggaccaagccgagctggagcag
tacgatggtgtggccgcggggaaatacaccgtgggcttgggccaggcccgcatggggttc
tgctcagaccgcgaggacatcaactctctgtgcctgaccgtcgtccagcggctcatggag
aggaacggcttgtcctacgacagcatcggccgcctagaggtcggcaccgagaccatcatc
gacaagtccaagtctgtcaagacggtgatcatgcagctgtttgaggactgtgggaacaca
gacgtggagggcatcgacaccacaaacgcctgctatggtggaacggccgcgctcttcaac
gcggtaaactgggtggagtccagctcgtgggacggacgctacgccctggtggtcgcaggc
gacatcgccgtctacgccacagggagtgcccggcctacagggggcgccggtgcagtggcc
atgctggtggggccgaatgctccattagcctttgaacgaggtctgcgggggacacacatg
caacatgcctacgacttctacaaaccagacctgatgtccgagtaccctgtggtggacggc
aagctgtccatcgaatgctacctcagtgccttggatcgctgctactcagtgtaccgcaac
aagatccacacgcagtggcagagagagggttcagataagcgcttcagcctggaagatttc
ggcttcttggtcttccactctccgtactgcaagctggtgcagaagtcggtggctcggctg
atgctcaacgacttcctgaaccatcccaaccccaacacagagaccgggcccttcaccggc
ctggatgccttcagagacgtgaagccagaggagacctacttcgacagggacgtggagaag
gccttcatgaaggccagcgccgatctgtttgaaaggaagacgaagacgtcgcttttggtc
tccaatcagaatggaaacatgtacacgccctccgtttacggctgcctggcctccgtcatt
gcagaacacagcccctcacagctggccggacagaggatcggagtcttctcttacggctcc
gggttcgccgcctctctgtattccctcagagtcacacaggaccacaccccgggatccgct
ttagataaactggtttccagcttgagtgacctgggagtcaggctggactccaggaagaag
gttgctcctgcagtcttctctgacagcatgaagctgagggaagacactcaccacttagcc
agctatgtccctcgaggctctgtggaggatctgttcccagggacgtggtacttgaccaga
gtggatgagaagcatcgcagggaatattcccgcagacctctggatgacgacctccctgca
gagccggagctggtttgcttgggtgctgctgctcagcacatcccaagtccagtcaagaaa
atgccccgcatccctgccaccaccacagctcatgaggccagcagctag
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