Oncorhynchus masou masou (cherry salmon): 135504978
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Entry
135504978 CDS
T10723
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135504978
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135504978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135504978
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omm04990
]
135504978
Membrane trafficking [BR:
omm04131
]
SNARE
SNARE associated proteins
Others
135504978
Domain-containing proteins not elsewhere classified [BR:
omm04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
135504978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
135504978
NCBI-ProteinID:
XP_064780031
LinkDB
All DBs
Position
18:59163671..59178374
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AA seq
1065 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGALPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTKRKESYDTVSQSSGGSDTVEVQRGG
PGVPGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
EISNMENNGNAKRPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSET
QGHVTHLAGPSNPASLGSDQEEPSTKTHAPSNVYSHIEGPSSLSDCVESTSTTPHLPVIE
TPQEKKTEYSVKSASEPSAHMNLHRTTSALSRTVSTDSVTHSHSWISEDDIYKPHLEELA
DPDESLLGSGPACVNGFTSPPLEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTV
GMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDACVTSAEGRFDLAFPGKRLLMRA
ANCDEAEDWVDRITEAVNKCRPLHLLDDQWEVLQLSDSSVTPDEPPKSSPSSPSSVPASP
DRGGAVVEQERQLELDWTRPTDPESDAIKEAVLYFCQDSEARNWTPLVFSLSLETLKGFR
MQDGQKVLRCSHPIEGIRDVVPDVSMGGPAFFRVVTARDTLKLRAKSSEEAQAWRGLIRG
ALNSYLESGEDWEPESPGVAPGAGGNTHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFK
CAGCPKVIGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALKLL
AQIEHEPLLNLDLLNPDLWEHAEAMAQTQSLRQRLRLLGDYLLTCRSGACKSIQTRLGPR
TYLLESSDLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHTSDII
FPFQFDTTTRCKECKAVSHLTCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcattgcagaagcgctacgtgacaaccgatgtc
gtggttaccagcgaggatggtgacgccaatctgctgtgctgcgcactggaggccatcttt
atccacggtatcaaaagcaaatatgttcgctccgaggctgggggacgcggcaggaaaggg
gggtcccggggagccctcccccagcctgtgttctggagcctcctcaagactgtcactcac
ggtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctaatggagtgctacctggcctccctg
ttccgcgagggctccaagctgcaggcccactaccagccctccgccctgcttctggatccc
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaagcgcaaggaatcc
tatgatacggtgtcacagtcgtccggcgggtcagatacggttgaagtgcagagagggggg
ccaggggtgccggggaaggggattgggggggtctcagggtttaagaccccactgaattcg
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggccacgaccccaagagcccagacaaggagccgtggccatgtgacctg
gaaatctccaacatggagaacaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcgtacgtgtcc
accccgggcgcagaccacctctctgagaacactgccttcagtggctccgacagcgagacc
cagggacatgtcacacatctcgcaggcccctctaaccctgcttcactggggtcagaccaa
gaggagccgtccaccaagacccacgccccctccaacgtgtactcgcacattgaagggccc
tccagtctcagtgactgtgtggagagcacatcgacaactcctcacctgcctgtcattgag
acgccacaggagaaaaaaacagaatattctgttaagagcgcctcggagccttcagcccac
atgaacctacaccgcactaccagcgcgctcagtcggacggtgtctacagactcagtcaca
cattcccactcctggatctctgaggatgacatctataagccacaccttgaggaactggct
gaccccgatgagtctttgctagggtctggcccagcttgtgtgaacggatttacctctccc
cctctagagcccgagaccccccagtccccccccagcgtggtccaccgcaggcagataggc
ctctccaaccctttccgcggactactgaagctgggacacctggagcggcggggcacggta
ggcatgtggcgcgactactactgcgagctctcgcccttcgagttccgcctctacctgaat
gcagaggagcgcacctgctgcgacaattgctccctgctgcgttgtgaggatgcctgcgtc
acctcggccgagggccgcttcgaccttgccttccccgggaaaaggctccttatgcgggcg
gccaactgcgatgaggccgaggactgggtggaccgcatcactgaagccgtcaacaagtgc
cgcccgcttcacctcctcgatgaccagtgggaggtgctgcagctctctgacagcagtgta
accccggatgagcccccaaaatcttccccttcatccccctcctccgtacccgccagtccc
gatcgagggggggctgtggttgagcaggagcggcagctggagctggactggacgcgtccc
acagacccagagtcagacgccattaaggaagcggtgttgtacttctgccaggactctgag
gctcgcaactggactcctctcgtcttctccctctccttagagactctcaagggcttccgg
atgcaagacgggcagaaggtgctgcgctgctcccaccccatcgaggggatccgggacgtg
gtcccagacgtttctatgggtggaccagccttctttagggttgtaacggccagggatacg
ctcaagctaagggccaagagctctgaggaggcacaggcctggaggggcctcatcagggga
gccctgaactcctacctggagagtggagaagactgggagcctgagagccccggggtggcc
cctggggcaggagggaacacccacagactggtgcagcatagactgaagggggacggggtg
ctgctggcccatctatgcacagtgcccacagagaaggggctggaccttcagggcttcaag
tgtgcaggttgtccaaaggtgataggcgtctcccgagggaaagccagactgtgtgagttt
tcagggcagtactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgc
atggtgcacaactgggacctcgcacctcgggaggtctccaggcatgcccttaagctgctg
gctcagattgaacatgagcccctgctcaaccttgaccttttgaaccctgacctgtgggag
catgccgaggccatggcccagacacagagcctcagacagaggctgcgtctcctaggagac
tacctgctcacctgccgcagcggagcatgcaagagcatccagaccagactgggtcctagg
acatacttattagaatcaagcgatctctacagtgtcatggacttacgacagatagcggag
ggaatgtatgtggcctacctgaacactctgatccagtttgcctccaaccacgtccaccac
tgtgacctttgcacccagaggggcttcatctgccagatttgtcacaccagtgacatcatc
tttcccttccagtttgacaccaccaccaggtgtaaagagtgtaaggccgtgtctcactta
acctgcaaggccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtacctcgag
agagatctgcaggactaa
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integrated database retrieval system
