Oncorhynchus masou masou (cherry salmon): 135505783
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Entry
135505783 CDS
T10723
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03320
PPAR signaling pathway
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135505783
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
135505783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135505783
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135505783
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135505783
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
135505783
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135505783
NCBI-ProteinID:
XP_064780996
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Position
2:complement(44167660..44204594)
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AA seq
441 aa
AA seq
DB search
MKHEGSLLPLEPPHHAGFSSPPQKGPSSLAEKSSPLLMEPSNIKADPAGDMPANTEGQPV
KRKKGPAPKMMGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEM
DMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRGKKMKKNEEEIARTSAVVTPIPVPEVV
PLEPEQLEMIEKLVAMQKQCNKRSFIDRPKVTVIPWPQSQDPQNREVRQQRFAHFTELAI
MSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYN
KEDFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAINIFSAGQRSSGMLVWNRAHM
QDRPNVQDHELVERLQQPYVNALRSYIMIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgagggcagcctcctccccctggaaccaccccaccatgcagggttttccagc
cccccccagaaagggccttcctcactagctgagaagagcagcccgctgctcatggagccc
agcaacatcaaggctgaccccgccggcgacatgcctgccaacacagagggtcagccggtg
aagaggaagaagggtccagcccccaagatgatggggaacgaggtgtgcagcgtgtgcggg
gacaaggcctcaggcttccactacaacgtgctgagctgtgagggctgcaagggcttcttc
cgccgcagcgtcatcaagagcgcccagtactcgtgcaagaacaacggccgctgtgagatg
gacatgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggc
atgctggaacaatgcgttctctcagaggagcagatccgagggaagaaaatgaagaagaac
gaggaagagattgcacgcacgtctgccgtggtgacccccatcccggtgccggaggtggtc
ccgctggagcccgagcagctggagatgatcgagaagctggtggccatgcagaagcagtgc
aacaagcgctcgttcatcgaccggcccaaagtcacggtgattccgtggccccagagtcag
gacccccagaacagggaggtacggcagcagcgctttgcccacttcaccgagctggccatc
atgtcggtccaggagatagtggactttgccaagcagttgcctggctttctagagctcacc
agagaggaccagattgccctgctgaagacctcaaccattgagatcatgctgctggaaaca
tcgcggagatataaccctgccattgagagcatcacgttcctgaaggacttcagttataac
aaggaggattttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttc
tccaagggcatgaatgacctgcatctggacgaggcggagtacgctctgctcatcgccatc
aacatcttctctgcaggtcagaggtcaagtggtatgctagtgtggaacagagctcatatg
caagaccggcccaatgtgcaggaccatgaactggtggagagactacagcagccgtatgtg
aacgcacttcgttcttacatcatgataaagagaccaaacgatcatctgatgtttccacgc
atgctcatgaagctggtcagcctccgcaccctcagcagcgtccactctgagcaggtcttc
gccctgcgcctccaggacaagaagcttccgccgctgctatctgaaatctgggatgtccac
gagtga
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