Oncorhynchus masou masou (cherry salmon): 135506989
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Entry
135506989 CDS
T10723
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135506989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135506989
04121 Ubiquitin system [BR:
omm04121
]
135506989
Membrane trafficking [BR:
omm04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
135506989
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135506989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR41
DSE1_N
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_DCAF12
ASA1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
NBCH_WD40
F-box
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_ACSF4
CFAP251_N
Beta-prop_SPT8
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
TRM82_WD
Beta-prop_RIG_1st
Ge1_WD40
CDtoxinA
WD40_RFWD3
KNTC1_N
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
PALB2_WD40
Beta-prop_IFT140_2nd
Beta-prop_WDR19_2nd
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
135506989
NCBI-ProteinID:
XP_064782509
LinkDB
All DBs
Position
20:13341530..13514003
Genome browser
AA seq
867 aa
AA seq
DB search
MNLFCSQILALSGNLFSLLVQQYIFDPNIFNVFFGWIAIFISLSTLVLPPLTALTERGQA
GRGEESNPQCGLTERLNAKPFSSSDSLVKVQEVASWLLEMNQDLLSGGSRRGLGGRRGGP
GAQRGNASSSARTPQGQQPEEEADEEEHMNRVVEDQGHQQSRVQPAASAGGEGVEEPWTS
RQNGPQGDGEEEDGGGVPNEVNGGVTKGGRWMWEAERRQQGGDDEEEQEEENNNSGSQQG
EEEEERTEGRARTGREEEEDDEEEMDQDSDDFEHSGESGREEEEEEEEEGEDGLHSPSLR
SDVSVPNNNLDQSSGCQHQSSPIKKKMKRKLDHGPEVRTFPSGKKPCKGSEYPSATGLVP
YPATPTTFGHIRTANGQGQQRRRITSIPSPTGLQEWLRTFQSWSGPEKLMALDELIDSCE
PTHVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW
REKCREEAGIDEPLAFKKRKITKPGFTHSPWKCAYIRQHRIDTNWRRGDLRSPKVLKGHD
DHVITCLQFCGNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTD
RTLKVWNAETGDCIHTLYGHTSTVRCMHLHEKTVVSGSRDATLRVWNVETGQCLHVLMGH
VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLD
TSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP
HKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT
KLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgttctgttctcagattttggcactgtctgggaatcttttttctctccttgtc
caacaatacatatttgaccccaatatattcaatgttttctttggatggattgcaatattt
atttccttgtcgacgttggtcctgcctccactgacagccctaacagagaggggccaggcc
gggagaggagaggagagcaacccccagtgtggcctgactgagagactcaatgccaagcca
ttctcctcctcagacagcctagtgaaggtccaggaggtagcaagctggcttttggaaatg
aaccaggatctgctgtcggggggcagcaggcggggactggggggccggcgagggggcccg
ggggcccaacgaggtaacgcctcctcctcggcccggacgccccagggccagcagcctgaa
gaggaggccgacgaggaggagcacatgaaccgggtggtggaggaccaaggacaccagcag
tccagagtccagcctgcggcctctgcagggggggaaggagtggaagaaccgtggacctcc
aggcagaatggaccccagggagacggggaggaggaggatggaggaggagtacccaacgag
gtgaacggaggagtgactaagggcggccggtggatgtgggaggcggagcgacggcaacag
gggggggatgacgaggaggagcaggaagaggagaacaacaacagtggcagccagcaggga
gaggaggaggaggaaaggacagagggaagagcgagaacggggagggaggaggaggaggat
gacgaggaggagatggaccaggacagtgatgactttgagcattcgggggagagcgggagg
gaggaggaggaggaagaggaggaggagggggaggacggcctccactcaccctccctcagg
agtgatgtgtctgtccccaacaacaacctggaccagtcctcggggtgccaacaccaaagc
tcacccatcaagaagaagatgaagagaaagttggaccatggcccagaggtccgaactttc
ccttcaggaaaaaagccctgcaaaggctctgagtatccaagtgctacagggctggtcccc
tacccagccacccccaccacgtttgggcacatcaggacagctaacggtcaggggcagcag
aggcggcgtatcacctccatcccttctcccacaggtctccaggaatggctccggacattt
cagagctggagtggcccagagaagctgatggcgctggatgagttgatcgacagctgtgag
cccacgcatgtcaaacacatgatgcaggtcattgagccgcagttccaacgcgacttcatc
tcactgctgcccaaagagttggccctgtacgtgctgtcgttccttgagcccaaggacctg
ctgcaggccgctcagacctgtcgttactggaggatcctggctgaggacaacctcctctgg
agggagaagtgccgggaggaggcaggcattgatgagcctctagccttcaagaagaggaaa
atcaccaagccgggcttcacccacagcccctggaagtgtgcgtacatcaggcagcatagg
atagacaccaactggaggagaggagacctccgatcacccaaggtgcttaagggtcatgat
gaccatgtcatcacctgtctccagttctgtggtaaccgcatcgtcagtggctctgacgac
aactcgctcaaggtctggtcggctgtcacgggaaagtgtctgaggacgttggtgggccac
acggggggcgtgtggtcgtcccagatgagggacaacatcatcatcagcggctccaccgac
cggacgctcaaggtctggaacgcggagacgggcgactgtatccacaccctgtacgggcat
acctcaacggtgcgctgtatgcacctgcacgagaaaacggtggtgagtggttctcgcgac
gccacgctgcgcgtgtggaacgtggagacgggccagtgtttacacgtcctcatgggccac
gtggcggcggtgcgctgcgtccagtacgacggccgcagggtggtcagcggggcctacgac
ttcatggtcaaggtctgggaccccgagactgagacctgcctccacacgctgcagggccac
accaacagagtctactcactacagtttgatgggatccacgtggtgagtggtagcctggac
acgtctatccgggtgtgggatgtggagacgggtaactgcatccacactctgacaggtcac
cagtccctcaccagcggcatggagctcaaagacaacatcctggtctcgggcaacgccgac
tccaccgtcaagatctgggacatcaagacgggacagtgcctgcagacgttgcaaggtccc
cacaagcaccagagcgccgtgacgtgcctgcagttcaacaagaactttgtcatcaccagc
tcggacgacggcacggtgaagctgtgggacctgaagacgggcgagttcatccgcaacctg
gtgacgctggagagcggcggcagcggcggggtggtgtggcgtatccgcgcctccaacacc
aagctggtgtgtgccgtgggaagccgcaacggcaccgaggagacaaaactactggtgcta
gactttgacgtggacatgaagtga
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