Oncorhynchus masou masou (cherry salmon): 135507951
Help
Entry
135507951 CDS
T10723
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135507951 (bcl11ba)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135507951 (bcl11ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
CCHC_BCL-11A
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF7565
zf-C2H2_ATbp_2nd
DUF3268
zf-C2H2_CASZ1
Motif
Other DBs
NCBI-GeneID:
135507951
NCBI-ProteinID:
XP_064783852
LinkDB
All DBs
Position
21:complement(22515621..22586821)
Genome browser
AA seq
855 aa
AA seq
DB search
MSRRKQGNPQHVSQRELIAPAEADHVDGGLSVSDSLTQPHPHPHLQPHPLLSHPALLDPS
LSDSLAMGLGDHDLLTCGQCQMNFPLGDILLFIEHKKKQCQALLQGPGCYDKMAADRSSP
SPPHQQQQNQGRHGHSQLRKVVEPVEIGIQVTPEEEEDERLMVTPTKGICPKQESALAGG
RDEPSSYICTTCKQHFPSAWFLLQHAQNTHGIRIYLESNPSSASLTPRITIPGPPMGQDS
IPQSPLTNFLGESSPFHLLRMTGPMLREPPPGFMENRGGLPNTPPFVSPPPRHHLDPHRL
ERLSAEEMGLISQHPSAFERVMRLTPMAIESQSMDFSRRLRQLAGNNNVATPPLSPSRVN
PMHRLLNPNPFQPSPKSPFLSTPPLPPMPPNSTTPPQTQAKSKSCEFCGKTFKFQSNLVV
HRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKSGSMTGRSDDGLSTTSSPEPGTSD
VTGEGMKNRDGDFRGEGEEEEEEEEEEEPENESRPESNFSMDNMEFYRNRENGSKPPSDE
KNALSLGKMVESVGLSTIQQYNNLIVDNRKNRMLFSKRGSDGQRDTGDEDSVVGEMEREH
HHHQMERDHQKPTVNGRNCGSGDSFSGLFPRKPTPITSPCLSNSSNKRIKIEKDLEMPPA
PLIPSENVYSQWLVGYAASRHFIKDPFLGFTHSRQSPFGTSSEHSSENGSLRFSTPPGDL
LDGGLSGRSGTASGGSTPHLGGPGPGRPSSKESRRSDTCEYCGKVFKNCSNLTVHRRSHT
GERPYKCELCNYACAQSSKLTRHMKTHGQMGKEVYRCDICQMPFSVYSTLEKHMKKWHGE
HLMTNEVKIEQAERS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcaggggaacccacagcacgtgtcacagagagaattaatagcaccg
gcggaggctgaccatgtggatggcggactttccgtgtctgactccctcacccaacctcac
ccccaccctcaccttcaacctcaccccctgttgtcccacccggccctgctggaccccagc
ctatctgacagcctggccatggggctgggggaccacgacctgctcacctgtggccagtgt
cagatgaacttccccctgggagacatcctgctcttcatcgagcacaagaagaagcagtgc
caggccctactgcaaggtcctggctgctacgacaagatggccgccgaccgcagcagcccc
tccccgccccaccagcagcagcagaaccagggtcgccacggtcacagccagctgaggaaa
gtggtggaaccggtggaaatcggaatccaggtgacaccggaggaggaagaggatgagagg
ctgatggtgacgcccaccaaaggaatttgccccaagcaggagagtgccctggcaggagga
agggatgagccttcaagctacatctgcaccacgtgtaagcagcacttccccagcgcctgg
ttccttctacagcacgcccagaacacccacggcatccgcatctacctggagtccaacccc
tccagcgcctcgctcaccccccgcatcaccatccccgggccccccatgggccaggactcc
atcccccagtctcccctcaccaatttcctgggagagagcagccccttccacctgctgagg
atgaccgggcccatgctccgagagccccctccaggcttcatggagaaccgcggaggcctc
cccaacacacctcccttcgtcagccccccaccccgccaccacctggacccccaccggctg
gaacgccttagtgccgaagaaatggggctcatctcccagcaccccagtgccttcgagagg
gtgatgcggctaacgccgatggccatcgaatcccagtccatggacttctccaggcggctc
cggcagctggcagggaacaacaacgtggccacccctcctctgtcgcccagccgggtcaac
cccatgcaccgcctgctcaaccccaaccccttccagcccagcccaaagtctccctttctc
agcaccccgcccctgccgcccatgccccccaacagcaccaccccgccccagacgcaggcc
aagagcaagtcatgcgagttctgtgggaagaccttcaagttccagagtaacctggtggtc
caccggcggagccacaccggggagaagccctataagtgtcagctgtgtgaccatgcctgc
tcccaggccagcaagctgaagagacacatgaagacacacatgcataagtctggttccatg
acaggacggtctgacgacgggctctccaccaccagttcaccggagccgggcaccagcgac
gtgacaggagagggcatgaagaaccgagatggagacttcaggggtgagggcgaagaggag
gaagaggaggaggaggaagaggagccggagaacgagagcaggccggagtcaaacttcagc
atggacaacatggagttctaccgtaaccgtgagaatggctccaagccgccatcagacgag
aagaatgccctctctctgggcaagatggtggagagcgtgggcctgagcactatacagcag
tacaataacttgatagtcgacaatcgtaaaaatcggatgctcttctccaagagggggtcc
gacgggcagcgggacactggggatgaggactctgtggtgggagagatggagagggagcac
catcaccaccagatggaaagggaccaccagaagcccacggtcaacggcaggaactgtggc
tccggcgactctttctcaggcctgttcccccgcaaacccactcccatcaccagcccctgc
ttgtccaactcctccaataaaaggatcaagattgagaaggacctggaaatgcccccggcg
cccctcatcccctccgagaacgtctactcccagtggctggtgggatacgctgcctcacga
catttcatcaaagaccctttcctgggctttacccactccagacaatctccctttggcacc
tcctctgagcactcgtctgagaacggcagcctgcgtttctccacgcctcccggggacctc
ctggatggcggcctgtcggggcgcagcggcacagccagcgggggcagcactcctcacttg
gggggcccgggacctggccggcccagctccaaggagagccgacggagcgacacctgcgag
tactgcggcaaggtgttcaagaactgcagcaacctgacagtgcaccggcgcagccacacg
ggagagaggccctacaagtgcgagctgtgcaactacgcctgcgcccagagctccaagctc
acccgccacatgaagacccacgggcagatgggtaaggaagtataccgctgtgacatttgc
caaatgcccttcagcgtgtacagcactctcgagaaacacatgaaaaagtggcacggggaa
catttgatgaccaacgaggtcaaaattgagcaagccgagagaagctaa
DBGET
integrated database retrieval system
