Oncorhynchus masou masou (cherry salmon): 135508101
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Entry
135508101 CDS
T10723
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
Brite
Membrane trafficking [BR:
omm04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135508101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
135508101
NCBI-ProteinID:
XP_064784118
LinkDB
All DBs
Position
21:30322377..30329451
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AA seq
491 aa
AA seq
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MFLLSSLLLDPRLPGTVNSYSNMSSGPPQSPTVAKTEVTVEGECPIFAATFAYWDNILGP
RVCHIWAPRCEQPLLLSDGEVTFLANHTLNGEILRSTECGAVDVKFFVLAEKGVIIISLI
FDGELKGDKNTCALSIILPQTELAFYLPLHTVCVDRLKHIIRKGRIWMQKGYNIISVLSS
EIVPIMELLSSMKTHSVPEDIDIKDTILNDDDIGDSYHEDFLHKAVSSHLQTCGCSMVVG
SNPDKVNKVVLTLCLFLTPAERKCSRFCKADSTFKYDTGLFVQGLLKDSMGSFVLPFRQV
LYSPYPTTHIDVDINTVKQMPPCHEHTHIQRRYMRSELSALWKAASEEDIAPDTDTGIHT
DESFTPDLNVFQDVMHKDTLVKSFIDEVKHRHKVFMLKPGLNLRTTYLAQFLLILHRKAL
TLLKYIEDETRKGKKPFRSLRSLKTDLDLMVEGDLNIIMALAEKQRAGLHSFVFGKQFYT
SVQERDVLMSF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcctgtctagtcttcttcttgaccctcgcctcccaggaacggtaaatagttac
agtaacatgtcttcaggcccacctcagtcgcccacagtggctaagacagaggtgactgtt
gaaggtgaatgcccaatcttcgctgccacctttgcctactgggacaacatcctgggcccg
cgggtgtgtcacatctgggctcccaggtgcgagcaaccactgttgcttagcgatggcgaa
gtcaccttcctggccaatcacacgctgaacggggagattctgcgcagcacagagtgcggc
gccgtggacgtcaaattcttcgtcctagctgagaagggtgtcatcatcatctcgctcatc
ttcgacggcgagctgaagggtgacaagaacacctgtgccctgtccatcatcctgccgcag
acagagctggccttctacctgcccttgcacactgtctgtgtggatcggctcaaacatata
atccgcaagggacgcatctggatgcagaagggctacaacataatttctgtgttgtcatca
gagattgtccccatcatggagctgctgtcatccatgaagacacacagtgtcccagaggac
atagacatcaaggacaccatcctaaatgacgatgacatcggagacagctatcatgaagat
ttcctgcacaaggcagtcagttctcatctccaaacttgtggctgctccatggtggtcgga
agcaacccagacaaagtcaacaaggtagtgctcacactgtgcctcttcctcacccctgct
gagaggaagtgctctcggttctgtaaagctgactctactttcaagtatgacacaggactg
tttgtacaaggcctcctcaaggactccatgggcagttttgtcttgcccttccgccaggtg
ctgtactcaccctacccgaccacgcacatcgacgtggacatcaacacggtgaagcagatg
ccgccatgccacgagcacacacacattcagcggcgctacatgcgctcagagctcagcgcg
ctctggaaggcggccagcgaagaggacatcgcccccgacactgacaccggcatccacacc
gacgagtccttcacccccgacctaaatgtttttcaggatgttatgcataaagacaccctg
gtaaagtcattcatagatgaggtaaaacaccggcacaaagtgttcatgctgaagccaggt
ctcaatctgcgaactacctacttggcccagttcttgctgatccttcacaggaaggcgctc
acactactcaaatacattgaagatgagacgcgaaagggaaagaagcctttccgatccttg
cgcagcttgaagaccgacctcgacctgatggtggaaggcgacctgaatatcatcatggcg
ttggctgaaaagcaaagggctggactgcactcctttgtatttgggaagcaattctacacc
agtgtacaggagcgagatgtgctcatgagcttttga
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