KEGG   Oncorhynchus masou masou (cherry salmon): 135517849
Entry
135517849         CDS       T10723                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    135517849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omm03000]
    135517849
   04121 Ubiquitin system [BR:omm04121]
    135517849
   03036 Chromosome and associated proteins [BR:omm03036]
    135517849
Enzymes [BR:omm01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     135517849
Transcription factors [BR:omm03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    135517849
Ubiquitin system [BR:omm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     135517849
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135517849
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     135517849
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 135517849
NCBI-ProteinID: XP_064798571
LinkDB
Position
28:51716237..51770082
AA seq 1398 aa
MEASAESGRKLRSICRTMYDENEDFSDVEEIANVRGFNLEEKLVSDSYNTHFVQLMDGKD
FTYEYVQREALQTPLIFKAKDGLGIRMPDPEFTVSEIKGLVGSRRAVDVMDVSTQKGSEM
SMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNMWPLKLKRRQ
TEATNVISEMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHVFKGGKVFWLVPPTPHNL
ALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILH
SFNIPMQLSIYEIENRTKVHSKFRYPFYHEMCWYVLERYVHCLTKRSHLTPEFRREPLLI
DLETKLSTESPSSDSRSQDMDEEDSCETQQGRDEQGDRSAFDDPCSPDNRKGKSSGLRHL
KAALSNDSEDSCIPTSTQPPEFPKTPFGSPVSESLSKWTHLTEFELKGLKALVEKLEALP
ENKKGVPDGIKDPQALLEDMKVVLKEHEDDDPKMAASGVPVVFWPKKSAKQQRPPNRPKP
KMAASSPAAAVKLSASRSTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQ
SCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEDKFNRMLMECSICNEIVHPLCLKVKD
SGGVVNDELPNCWECPKCNHSGKTGKQKRGPGFKYASNLPGSLLKDSRLNRDIKEEPDPP
SLPTSPTGTTATVATVKRKAERDDTPKTKAEESPPLKKRSPMLSLGGLPRPRPEDNPLRK
KRMLFDIKDEDEPPVVKKKKKPPKPDDLLIPKLLKTIKQEQVDEDDEHKDHEDEEEDRCT
GDRVVTKGKREEEEEDGDEEEEKDGGVEDSKDGTVKTMLSPLLRTSRARESDQSCSSSPR
AGPSSVGCDAPEKTPGQLKARKRRRLPNKELSKELSKELNLEIQKTEDCLANQNRRPLKR
EDSPANNSRRPLKTEDTSTNPNRRPPKTEDSPANHNRRPIKTEDGLSNHNRRPLRTEDCL
VNQNHRPMKTEPESDGEEPKPKRPLNNCTSDLGDWLHPRGRELNGTPRQLSPLGWNRSPP
ITPICPRPPPCRSPPKCVQMERHVIRPPPISPPPDRLPLEDGQTHMMHREVWMAVFGHLA
HRDLCVCMRVCKTWNRWCCDKRLWTRIDLNRCKSITPLMLSGIIRRQPVALDLSWTNISK
KQLSWLINRLPGLRMLLLSGCSWVAVSALCTASCPLLRTLDVQWVEGLKDAQMRDLLSPP
TDNRPGQLDNRSKLRNVVDLRLAGLDITDTSLRLLIRYTPQLTRLDLSYCNHVTDQSVNI
LTTAGTTTRDSLTDINLSVCNRVTDQSLAYFKRCGSICHIDLRYCKQVTKEGCERFVAEM
SVSVQFGLVEEKLLQKLC
NT seq 4197 nt   +upstreamnt  +downstreamnt
atggaagcgagtgcagaatctggacgcaaactgcgctccatctgccggacaatgtatgac
gaaaacgaggacttctctgacgttgaagaaattgcaaatgtcaggggtttcaatttggag
gagaaacttgttagtgactcatacaacacacatttcgttcagttgatggatggcaaagat
ttcacttatgagtatgttcagagagaggcacttcagacccctcttattttcaaagccaaa
gatggactgggaatcagaatgccagacccggagttcaccgtcagtgagattaaaggtttg
gttggtagccgtcgtgccgttgatgtgatggatgtgagcacccagaaaggctctgagatg
agcatggcccagtttgtccgctactatgagacacctgaggaagagagggacaaactcttc
aatgttatcagcctagagttcagccacaccaaactggagaacctcatcaagaggcccact
gtggtggatttagtggactgggtggacaacatgtggcccctaaaactgaaacgaagacaa
accgaagccactaatgtcatctcagagatgaagtaccccaaagtacagaagtactgtttg
atgagcgtgaagggctgctatactgacttccacattgatttcgggggcacgtctgtgtgg
tatcacgttttcaagggagggaaggtgttctggctggtgcctccgacgcctcataacctt
gccctgtatgaggactgggttctgtcaggcaagcagagtgacatcttcctgggagaccgt
gcagatggctgccagagggtggagctgaaacagggctacaccttcttcatcccctctggc
tggattcatgcagtctacacccctgaggacacgctggtgtttggaggcaacattctgcac
agctttaacattcccatgcaactctccatctatgagatagagaataggactaaggttcat
tccaagttccgctacccattctaccatgagatgtgctggtatgtcctggagaggtacgtg
cactgcctgaccaagcgctcccatctcactccggagttccgcagagagcctctgctaatc
gacttggaaactaagctgagcacagagagcccctcctctgactcccggagtcaggacatg
gacgaggaggactcctgcgagacgcagcagggacgggatgaacagggtgacaggtcagca
tttgatgatccctgctctcctgataacaggaagggtaaatccagcggccttcgacacctc
aaagctgccttgtccaatgattctgaggacagctgcatccccacctccacccagcctcca
gagttccccaaaaccccctttggctcaccagtctcagagtctctgagtaaatggactcat
ctgactgagtttgaactgaagggcctcaaggcccttgtggagaaactggaagccctccct
gaaaataagaagggtgttccagatggcatcaaggacccccaggccctgctggaggacatg
aaggttgtcttgaaggaacatgaagatgatgaccccaaaatggctgccagtggagtacct
gtggtgttctggcccaagaagtctgccaagcagcagcggcctcccaacagacccaaaccc
aaaatggcggcctcgtctcctgcggcggcggtcaagctgtcggccagccggagcacgtct
ggcgccaggaggagaaggacgcgttgtcggaagtgtgaggcttgcctgaggacagagtgt
ggagaatgccacttctgtaaagacatgaagaagttcggaggaccaggtcgcatgaaacag
tcctgcatcatgaggcagtgtatagcgcctgtactgccccacacagcggtgtgtctggtg
tgtggagaggcagggaaggaggacacagtggaggaagaggaggacaagtttaaccgcatg
ctcatggagtgctccatctgcaatgagatagtccatcctctctgcctcaaggtgaaagat
tctggtggagttgtaaatgacgagttgccaaactgctgggagtgtccaaaatgcaaccat
tcagggaagacagggaaacaaaaaagaggaccagggttcaagtacgcgtccaaccttccc
gggtcgctgctgaaggactcacgattgaaccgtgacatcaaggaagagcccgacccgccc
agtctgccaacatcacccactgggaccacggcaaccgtagccacagtgaagagaaaggcg
gagcgtgatgacacccccaaaacgaaagcagaggaatctcctcctctgaagaaacgttct
cccatgctgtctctgggcgggctgccccgacccaggcctgaggacaaccctctgaggaag
aagaggatgctgttcgacatcaaagatgaggacgagcctcctgttgtcaagaaaaagaag
aagcccccaaaacctgatgaccttttgatccccaagctgttaaagaccatcaagcaagag
caagtagatgaggacgacgaacacaaagaccatgaagatgaagaggaggacagatgcaca
ggggacagggttgtaactaaagggaaaagagaagaggaggaagaggatggagatgaggag
gaggagaaagatggtggtgtagaggacagtaaagacggtacagtaaagactatgctgagt
ccactgctacggacgtctagagccagagagagtgaccagtcctgctccagctctccccgg
gcagggcccagcagtgtagggtgcgatgccccagagaagacacctggccagctgaaggca
cgcaagcgccgccgcctccccaacaaagagctgagcaaggagctgagcaaagagctcaat
ctggagattcagaagaccgaggactgcctggccaatcagaaccgcagaccactgaagagg
gaggacagcccagccaataacagccgtcgacccttgaaaactgaggacacctcgaccaat
ccgaaccgcagaccaccaaaaacagaggactctcctgccaatcataaccgcaggccaatt
aagactgaggatggtctatccaatcacaaccgccggccattgaggactgaggactgctta
gtcaatcagaaccacaggccaatgaagacagagcctgagagcgacggggaggagcctaag
cccaagcggccactcaacaactgcaccagtgaccttggagactggctccaccccaggggg
cgggaattaaacgggacgccccgccagctctcgccactggggtggaatcgcagccctccg
atcacacctatttgcccacgccctcctccctgccgctcaccacccaaatgtgtccagatg
gagcgtcacgtgatccggccgcctcccatcagccccccgccagacagactgcccctggaa
gacggacagacccacatgatgcacagggaggtgtggatggccgtgttcgggcacctcgca
cacagagacctttgtgtctgcatgcgcgtctgcaaaacctggaacagatggtgctgtgat
aagaggctgtggacgcggatcgatctgaaccgctgtaagtccatcactcccctcatgctg
agtggcatcatccgcagacagcctgtggctctggacctcagctggaccaacatctccaag
aagcagctcagctggctcatcaacaggctgccaggtctgcggatgctgctgctctcaggc
tgctcctgggtggctgtgtctgccctctgcaccgccagctgcccgctgctgaggacccta
gatgtccagtgggtagaggggctcaaagacgcccagatgagggacctactctcacccccc
acagacaacagaccaggtcagctggacaacaggagtaagctgcggaatgtggtggacctg
cgtctggccgggctggacatcacagacacctccctgcgcctcctcatccgctacacgccc
cagctgaccaggctggacttgagctactgcaaccacgtcactgaccagtcggtcaacatc
ctgaccactgctgggaccaccaccagagactcgctcactgacatcaacctctctgtgtgc
aacagagtcacggaccagtcgctggcctacttcaagcgctgtggaagcatctgtcacatt
gacttgcgctactgcaagcaggtgaccaaggagggctgtgagcggttcgttgctgagatg
tcagtgagtgtacagtttggacttgtagaggagaaactactgcagaaactctgctag

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