Oncorhynchus masou masou (cherry salmon): 135519062
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Entry
135519062 CDS
T10723
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00260
Glycine, serine and threonine metabolism
omm00270
Cysteine and methionine metabolism
omm00670
One carbon pool by folate
omm01100
Metabolic pathways
omm01230
Biosynthesis of amino acids
Module
omm_M00035
Methionine degradation
omm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
135519062
00270 Cysteine and methionine metabolism
135519062
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
135519062
Enzymes [BR:
omm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
135519062
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
135519062
NCBI-ProteinID:
XP_064800182
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All DBs
Position
29:complement(16092872..16116349)
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AA seq
613 aa
AA seq
DB search
MPSVPSSIDSVRPVSSICPHAAMLHNNATKANGDATILNGGSKVNGEAMENLGLFNMNGL
AQVNGEEGENDLENTVAGTEERQWIRPDLPSRCTWKLGVSSAESPHCHSAKTEAPRILPN
ILRRIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLRMVEDAERAGILKPG
DTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDS
PESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGG
TITGIARKLKERCPNIKIVGVDPEGSILAEPEELNMTDKTQYEVEGIGYDFIPTVLDRSV
IDKWYKSNDEESFAMSRMLIREEGLLCGGSSGTAMAAAVKMSTELKEGQRCVVILPDSIR
NYMSKFLSDNWMCDKGFLTPNDLMVSKSWWWNLTLQSLNLCAPITVLPSVNIKKTIKILK
EKAFDQAPVVDESGMILGMLTLGNMLSSVLAGKVKASDPVSKVLYKQFKQVRLTDNLGKL
SRILETDHFALVVHDQIQFMADGSSCLRQMVFGVVTSIDLLNYITTRERRGSARERTMSE
CSMTSECSLTDEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggttccctccagcatagactctgtgcgccctgtgtcctccatctgcccccac
gcagctatgcttcacaacaacgctaccaaggccaacggagacgccaccattttgaatggg
gggtccaaggtcaatggagaagcaatggagaacttggggttgttcaacatgaatggattg
gcccaagtgaatggggaggagggggagaacgacctggagaacacagtcgcaggcactgag
gagaggcagtggatccgtcctgatctgcccagtagatgcacctggaaattgggcgtgtcc
tctgccgagtcccctcactgccactctgcaaagaccgaagcacccagaattctacccaac
atcctcaggaggattggagacacacctttggtccgcatgaacaagatacccaaagccttc
ggcctcaagtgtgaactcttggccaagtgtgagttcttcaatgcagggggcagtgtgaag
gaccgtatcagtctaaggatggtggaggatgcagagagagctggcatcctcaaacctgga
gacaccatcatcgagcccacctccggcaacaccggtattggtctggccctggcctctgca
gttaaaggctatcgctgcatcatcgtcatgcctgagaagatgagcatggagaaggtggat
gtgctgagagccttgggggcggagatcgtgcgtacccccacctccgcccgttttgattcg
ccagagtctcacgtgggcgtagcctggcgtctgaagaacgagattcctaactctcacatc
cttgaccagtaccgtaacgctagcaaccccctggcccactacgacactactgccgaggag
atcctggagcagtgtgatggtaaggtggacatgttggtggcaggagctggcacaggtggc
accatcactggcatcgcccgcaagctgaaggagagatgccccaacatcaagatcgtgggc
gtggaccctgaaggttctatcctggctgagccagaggagctgaacatgacagacaagacc
caatacgaggtggagggcatcggatatgacttcatccccaccgtgctggacagatctgta
attgacaagtggtacaagtccaatgatgaggagtcctttgccatgtcacgcatgctgatc
agggaggaggggcttctttgcggaggtagttcaggcacggccatggctgcagcagtgaag
atgagtacagagctgaaggagggccaacgctgtgtcgtcatccttcctgactccatccgc
aactacatgtctaagttcctcagtgacaactggatgtgtgataagggcttcctaacccca
aatgacctgatggtgtccaaatcctggtggtggaacctgactctgcagagtctgaacctg
tgtgcccctatcaccgtgctgccctccgtcaacatcaagaagaccatcaagatcctcaag
gagaaggcttttgaccaggcacccgtcgttgacgagtccggcatgatcctagggatgctt
accctgggcaacatgttgtcttctgtgctggctgggaaggtcaaggcgtctgaccctgtc
tccaaggtgctctacaaacaattcaaacaggtgcgactgaccgataacctgggtaagctg
tcccgtatcctggagacagatcactttgccttggtggtgcatgaccagattcaattcatg
gcagacggctcctcctgtctgagacagatggtgtttggggtggtgacgtccattgaccta
ctcaactacatcaccacgcgtgagaggcggggaagcgcacgggagcgcacgatgtcggag
tgctccatgacatctgagtgctcgctgaccgacgagctgtaa
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