Oncorhynchus masou masou (cherry salmon): 135519294
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Entry
135519294 CDS
T10723
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135519294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135519294
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
135519294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
135519294
NCBI-ProteinID:
XP_064800513
LinkDB
All DBs
Position
29:29627982..29728086
Genome browser
AA seq
1520 aa
AA seq
DB search
METSAPTATEKKEHKGSGLDGSSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGHHGLAGSPVISDGISLIRLSPHAAGTGDSPFSPPHSYVHPQMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKEHGLFSLPPPPPGANPAEYYHLMASGRSTYG
DLIMQTGAAAAAAAAAAHLPDYISPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHPINPMAYQQLLNQQRGLS
AFGHTPPLIQPSPSFAARQHAHALAASTLNTTHNTSSSESNQNAGGDPAVSSTVNPMITK
RHKVKTEAEGPRPISPCFQEHVLDLSEELDKDECKQEPEAVYETNCHWVGCSKEYDTQDQ
LVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSRRGMDGKMEAN
STIRGAEDCLQVKSIKTENSITYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSF
GDLSALDDPPMVDSSTLSPRNSVGVGLGLHKGGGVTIKLENIKKERLKNVRDSCPWANSG
PQAPQVRNTKLPPIPAVGSLLENSNMIAPPGPYPGQRLGDLSSCEVTMLNQLNEQGRRDS
NTSTASSAYISRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEAS
QCGGGGGNLSSLLSLTPAQHYHLKAKYAAAIGGAPPTPLPNMERMSLRTRMALYGDHSQE
RESLSRSQLFHPPNAAVPRRCSDIGYGSHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPR
VQRYNSMNSMNPNSMMPPPSADRRGLAMQSYTRSDGSLHHPFAPRPPSISENVVMETMAV
DGLDHAGDEDMVLPDDVVQYLRSQNTGTGQSAGPANYANSQSQGGFQVQGNMTSSQQQFY
GQRRMAMVDANMPLSGSSQVPLPPYQMSPGSGSQQQQYPASHSMNNKNNMPVQWNEVSSG
TVDATATSRLTKQNLLRNNNLAMVQQRQNFGHFQGRMGSNSNQQVMPMNQNMALQGFTQR
SNSQWINSVQQQQRQPCSMNYPEQMSPQQGYGQEIIPVPNSGSGNGSFRPNFNGMALPNG
RVMATHNNPDTQIYRSRTPVESYAPHMIQVDQQNYSISSQQQDVNTGNRAGMQPRPPMEA
KSMSSRQHSGSRGMMQQNRFPQSDLHHNTSEASPKRPGSTAAHTGGHNRDSNSNASMFYA
GQIQMFEPNNNHNVSFNSPMSPVMGQTPGGTTVTMASPGVNQVTSTVDSSGSSGSISGVE
HAQIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRNSVTLASVPAGIGNMAIG
DMSSMLTTLAEESKFLNMMS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgctccgacagccactgagaaaaaggagcataagggatcgggtttagat
ggaagcagcttctcagacctgccaaagaaaccatctcccactactgtgaccagaggccct
caccatctcttccccacgtttcacacaccgatcccaatcgatatgcgtcaccacgagggg
aggtaccattacgagccacatcccctccacgccatgcatggacatcatggcctagcaggc
agcccggtcatctcagacggcatctctctgatccgtctgtccccccacgcagcagggacg
ggggattcccccttcagcccccctcactcctacgtccacccccagatggagcactacctc
cgctccatgcacagcagccccaccctctccatgatctctgctgcccgcggactcagccct
gcagaagtgacccatgagcacctgaaggagcatggtctgttcagcctgccccctccacct
ccaggtgccaaccctgcagaatactaccacctcatggccagtggcaggagcacttacgga
gacctcatcatgcagaccggggcggccgcagcagcagcagccgcagcagcacacctgccc
gactacatcagccctgtggatgtgtcccggttttccagccccagactgacccccaggctg
aacagaaagcgagccctgtccatctcccctctctcagacgccagcatcgatctgcagacc
atgatccgtacctcgcccaactccctcgtggcctacattaacaactcacgctccagctct
gcagccagcagctcctatggacacctgtctgtcagcggcatcagtccgtcgttcaccttc
ccccaccccatcaaccccatggcctaccagcagctgctcaaccagcagagaggcctgagt
gcattcggccatactcctccccttatccagccctcgccctcctttgctgcccgccagcat
gcccacgccctggcagcctccaccctcaacaccacccacaacacctccagctctgagtcc
aaccagaatgctggtggtgacccggcggtgagcagcacagtcaaccccatgatcaccaag
aggcacaaggtcaagacagaagcagaaggaccccggcccatatcaccatgctttcaggag
catgtcctggacctgagtgaggagctggacaaagatgagtgtaagcaggagccagaggct
gtctacgagaccaactgtcactgggtcggctgcagcaaggagtacgacacccaggaccag
ctcgttcatcatatcaacaatgaccacatccatggggagaagaaggaatttgtgtgtcgc
tgggatgagtgctcgcgggaacagaagcccttcaaggctcagtacatgctggtggtccat
atgaggagacacactggagagaagccacacaaatgcacatttgaaggatgctgtaaggcc
tactctcgcctggagaacctgaagacccatctgaggtctcacacaggggagaagccttac
gtctgtgaacacgagggctgcaacaaagccttctccaacgcctcagacagagccaagcac
cagaacagaactcactccaatgagaaaccctacatctgtaagatccctgggtgcactaag
cgctacacagaccccagctctctcaggaagcatgtgaagacggtccacggacctgaggcg
cacgtcacgaagaaacaacgtggcgatgtgcctcccaggggtcctcctaaggggaatgga
gagaacgaggcaaacgccaaacagagtcgtagagggatggatggaaaaatggaggccaac
agcaccattagaggagcagaggactgcctgcaggtcaagtcaatcaagactgagaactca
ataacgtatcaatccagcccgggcggtcactcgtcatgtagcagtgagccgtcgccactt
ggcagtgcccacaacaatgacagtggagtagagatggccctgcacagtgggggcagcttt
ggggacctgagtgcactggatgaccctcccatggtggactcctccaccctctccccccgc
aactcggtgggggtgggtcttgggcttcataaagggggaggagtcaccatcaagctggag
aacatcaagaaggagaggctcaagaatgtgagggactcttgtccctgggccaactctggt
cctcaggcacctcaggtccgaaacaccaagctgcctcccattcctgctgttggttccctt
ctggaaaactctaatatgatcgctccacccgggccctaccctggtcagcgtcttggtgac
ctgtcatcatgcgaggtgaccatgctgaaccagctaaacgaacagggccgccgggacagc
aacaccagcactgccagctcagcctacatcagccggcgctcctctggcatctccccctgc
tactccagccgccgctcctccgaagcctcgcagttcagcaaccgccacaacaacatcagc
tcagccgactcctacgaccccatctccacagacctgtcccgtagatccagtgaggccagc
cagtgtggaggtggaggtggaaacctctctagtttgctcagcctcacccctgcccagcac
taccatctcaaggccaagtacgctgctgcaatcgggggagctccacctacacctctgccc
aacatggagcgtatgagcctcaggaccaggatggccctgtacggggaccactcccaggaa
agagagagcttatcccgctctcaactgttccacccacctaacgcagcagttcccagacgc
tgcagcgacatcggctatggtagccatagcatgatgccccacgaggtccctggaaacctt
ccccggcgagccagcgaccccgtccgcagacctaccctagacccactatcccttccacga
gtccaacgctacaacagcatgaacagtatgaaccccaacagtatgatgcctcctccctct
gctgaccgccggggcctggccatgcagagctacacgagatccgacggaagcctgcaccac
cccttcgccccacggccccccagcatctcagagaacgtggtgatggagaccatggccgtg
gacgggctggaccatgcaggagatgaggacatggtgctgcctgatgatgtcgtacagtac
ctcaggtctcagaacactggcaccggccaatcagcaggccccgccaactatgccaacagc
caatcacaaggcggcttccaggtccaggggaatatgacctcctcccaacagcagttctat
gggcagaggaggatggccatggtggatgccaacatgcccctgtctgggtcaagccaggtt
cccctacccccctaccagatgagccctgggtctggctcccagcagcagcagtacccagcc
tctcacagtatgaacaacaagaacaacatgccagtacagtggaacgaggtcagctcaggg
actgtggatgctacagccacctccagactcaccaagcagaacctcctcagaaacaacaac
ctggccatggtccagcagagacagaactttgggcatttccagggtagaatgggtagtaac
agtaaccagcaggtgatgcccatgaaccagaatatggcgctacaaggcttcacccagaga
agcaactcccagtggatcaactctgtccaacagcaacaaaggcagccatgcagcatgaac
tatcctgagcagatgagtccccagcagggatatggccaagagatcatccctgtccctaac
tctggatctgggaatggcagctttcgacccaactttaatggcatggcactgcccaacggc
agggtgatggctacacacaacaatcctgatacgcagatctacaggtcaaggacgccggtt
gaaagctatgccccccacatgattcaggttgaccagcagaactacagtatttcttctcag
cagcaagacgtcaatactgggaacagagctgggatgcagcccaggcctcccatggaggcc
aagtctatgagcagtagacaacactcagggtccagaggtatgatgcagcagaaccgtttc
cctcagtctgatttacatcacaacacctctgaggccagtccaaagaggccgggtagcacc
gcagcacatactggcggacataacagagactcaaactccaatgcttcaatgttttatgct
ggccagatccagatgtttgaacccaataacaaccacaatgtgagcttcaactcccccatg
tcccccgtcatgggccagactccgggaggcaccactgttaccatggcatctccaggggtc
aaccaggtcaccagcaccgttgactcatccggctcctctggatcgatctctggcgtggag
catgcccagatcgactttgacgccatgttggatgatggagaccactccagcctgatgtca
gggaccctcagccccggactcctcaccagcctgtcccagaattcctcgaggcttaccacc
ccccgtaactctgtgaccctggcctctgtgccagcagggattggtaatatggccatcgga
gacatgagctccatgttgaccaccctggctgaggagagcaagttcctcaacatgatgagc
taa
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integrated database retrieval system
