Oncorhynchus masou masou (cherry salmon): 135519906
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Entry
135519906 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10655
tripartite motif-containing protein 63 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135519906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135519906
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135519906
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135519906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-RING_2
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
CRLF3_N
zf-RING_6
Sina_RING
TRIM_CC
zf-RING_11
DUF8512
zf-RING_10
DUF5799
Cnd1
UvrD_C
Motif
Other DBs
NCBI-GeneID:
135519906
NCBI-ProteinID:
XP_064801194
LinkDB
All DBs
Position
29:complement(44973543..44981034)
Genome browser
AA seq
350 aa
AA seq
DB search
MDIQRTGSLVRPPSPMESLEKQLSCPICLEMFTKPVVILPCQHNLCRGCASDLYDSRNPY
RFSGGVFRCPTCRFEVVLDRHGVHGLQRNLLVENIIDIYKQQQEGGGGSGRGDSTETPLK
PKDSKEPMCQEHEGEKINIYCVTCQMPTCSMCKVFGQHKDCEVSPLGSVYQVQKGELSNA
IDTLVAGNGRLQALLNQMEDTCQAVQDNAQRAKQSLGERFDLLYAVLEERKGLLLEQIGK
EQDEKVTALRALAQHYSERLQAGSELTDTAVRALEQSSAAEFLLASKGLITQTKDTAKIS
LGEERPEPGFEKMDHFTLSTEHVEAILAKMDFGMVEDDAFEDAEGDEEEE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacatccagaggaccggctcgttggtgcgtccacccagccccatggagagcctggag
aagcagctgagctgccctatctgcctggagatgttcaccaagcccgtggtcatcctgccc
tgccagcacaacctgtgccgtggctgtgccagtgacctctacgactcacgcaacccctac
cgcttctcgggcggcgtcttccgctgccccacctgccgcttcgaggtggtcctggaccgc
catggcgttcacggacttcagcgcaacctgctggtggagaacatcattgacatctacaag
caacagcaggagggtggcgggggtagtggcagaggagacagcacagagactccactgaag
cccaaggactccaaggaacccatgtgccaggagcacgagggggagaagatcaacatctac
tgtgtgacctgccagatgcccacctgctccatgtgcaaggtgtttggccagcacaaggac
tgtgaggtgtcaccactgggcagtgtctaccaggtgcagaagggcgagctgagcaacgct
atcgacaccctagtggcaggcaacgggcgccttcaggccctgctcaaccagatggaggat
acatgtcaggcggtgcaggacaatgcacagcgtgccaagcaaagcctaggcgagcgcttt
gacctgctctacgcagtgctcgaggagcgcaaaggcctgctgctggaacagatcggcaag
gagcaggacgagaaggtgactgcgttgcgggcgctggcccagcactacagcgagcgactg
caggcgggatcagagctgacggacacagcggtgcgggccctggagcagagcagcgccgca
gagttcctgctggcttccaagggccttatcacacagaccaaggacaccgccaagatctcc
ctgggcgaggagaggcccgagccgggctttgagaagatggaccatttcacgctgtccact
gagcatgtggaggccatcctggccaagatggactttggaatggtcgaagacgatgcattc
gaggatgccgaaggggacgaagaagaggagtga
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